G597632


Basic Information

Item Value
gene id G597632
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 32021735 ~ 32021943 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU680921
gtgtgcccgtctccggagtctgaccagaagaccgcctcgtttccctctttttcggagtcgtttttttgggtcgctgcacgggatccgcgtcgcgaaaaacatattcttggtcgtactgatggtgagttgacgctgatcttatattcagtagttcttctcgactgtatgtaaggaaacctaagatgacctggggtactaatgtaagaaat

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU680921 True 209 lncRNA 0.48 1 32021735 32021943

Neighbor

gene id symbol gene type direction distance location
LOC110531742 LOC106594194 coding upstream 8532 32007023 ~ 32013203 (+)
LOC110527653 LOC106582631 coding upstream 305508 31204504 ~ 31716227 (+)
LOC118965379 NA coding upstream 947472 31073345 ~ 31074263 (+)
LOC118965378 NA coding upstream 948595 31071742 ~ 31073140 (+)
LOC118965377 NA coding upstream 950117 31052626 ~ 31071618 (+)
LOC110528942 NA coding downstream 175023 32196966 ~ 32257394 (+)
LOC110527657 rbm39 coding downstream 323705 32345648 ~ 32407998 (+)
nfs1 nfs1 coding downstream 446070 32468013 ~ 32480794 (+)
rbm12 rbm12 coding downstream 458993 32480936 ~ 32492404 (+)
LOC110527660 LOC106565032 coding downstream 466924 32488867 ~ 32519712 (+)
G597629 NA non-coding upstream 8209 32013318 ~ 32013526 (+)
G597566 NA non-coding upstream 24404 31965209 ~ 31997331 (+)
G597555 NA non-coding upstream 75023 31946476 ~ 31946712 (+)
G597554 NA non-coding upstream 83245 31938202 ~ 31938490 (+)
G596899 NA non-coding upstream 236623 31727662 ~ 31785112 (+)
G597646 NA non-coding downstream 11004 32032947 ~ 32033201 (+)
G597793 NA non-coding downstream 319652 32341595 ~ 32352331 (+)
G597798 NA non-coding downstream 389985 32411928 ~ 32412354 (+)
G597794 NA non-coding downstream 390786 32412729 ~ 32413587 (+)
G597787 NA non-coding downstream 392423 32414366 ~ 32417474 (+)
G596297 NA other upstream 939445 31081721 ~ 31082290 (+)
G596168 NA other upstream 1117848 30903179 ~ 30903887 (+)
G593774 LOC106593940 other upstream 1989114 30031959 ~ 30032621 (+)
G593513 LOC106610831 other upstream 2492825 29528027 ~ 29528910 (+)
G599004 NA other downstream 1213870 33235813 ~ 33236636 (+)
G599123 NA other downstream 1268583 33290526 ~ 33295528 (+)
G600013 NA other downstream 1944346 33966289 ~ 33966755 (+)
G600431 NA other downstream 2737404 34759347 ~ 34759658 (+)
G600531 NA other downstream 2949185 34971128 ~ 34971405 (+)

Expression


Co-expression Network