G598383


Basic Information

Item Value
gene id G598383
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 32518775 ~ 32519903 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU681720
tttccagctacaatagtcatttacaacattaacaatgtctacactgtatttctgatcagtttgatgttactttcaaaaacaaggacatttctaagtgaccccaaacttttgaacagtagtgtatatatcacacacacacacacacaccaccagttAAACAGTTGTTGTTACGTGAGTAGCCTACTTTATTCCATCAAATGTTTTGAAGGAGCATTTCATGAAATGCATTAAAGCCCTCCTTTTCCCCAATTTTGGATCATCACCATTGTTGAACTCCTTGTTAATTCCTGACTCGGAGGAATGAAAGAATAATAAGAAATATCTATGATTGttgaaaataaaatagaaaatacaGTTACATGTGGTACATAATTGGTATCAAAAGGTACAATGAGCATTGACACAGTAATTCCAGGATGTGATTTACACTTCTGATAATTTCCCTGTGTGGTGTGTTGGCTCCCTCGTGTGGCTAGAAGGGTGAAGCACTGCAGTTCTGCTTGCTCCACTAAGTCTTGATGGCAGCAACATTGACTGGATCTAGTTTCAGCATTTTGAAGTAGGACATAAGTTGATTTGGCACTTCAGCCAAGACGCTCTGGGCGAGGGCTTCCTTAGGATCCTGCAGAGGACGGAATAACAGTGTGATGGGATGAGTGCCAACAGCGgggcaacaaaacaaaaactcaAGATAGAAAAGTATGTCAAATCTGTCAATATTTTACCAAAGTGGTATGGAATGGTGTTTCACTACCCACGGATACTATTACAGACTAGACTGATGTAAAGTGATGTTCCATCGTGAATCTTCTCAGTGGTATTGACAACACACTGCACAATAACAACCACAGACTAAAATAAACATACATTGGCAAACTGTCTGAAGGGCACAAACTGTACAATGTCCCTGGCCACGGGTTTGCCACTCAGGGACTTGAGAATGCCTTCGTCTCCATCTAGCAGCTCCATTGCCTTGAAGTTGGCTTCGCCCACCCCGATGATGATGATGGACATGGGCAGGCGTGAGGCCTTGACGATAGCGTCCCGGGTCTGGTCCGGGGTCTGTGATCTCCCCATCGGTGATGATGAGTAGGACAAAGTATTG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU681720 True 1105 lncRNA 0.42 2 32518775 32519903

Neighbor

gene id symbol gene type direction distance location
si:ch211-15p9.2 LOC106582638 coding downstream 94125 32421664 ~ 32424650 (-)
psmf1 psmf1 coding downstream 195617 32305811 ~ 32323158 (-)
LOC110527655 tmem74b coding downstream 225524 32288164 ~ 32293251 (-)
bc10 bc10 coding downstream 252130 32261170 ~ 32266645 (-)
LOC110527654 LOC106582632 coding downstream 344239 32075882 ~ 32174536 (-)
LOC118965410 NA coding upstream 24055 32543958 ~ 32544012 (-)
LOC110527664 LOC106582643 coding upstream 272277 32792180 ~ 32822397 (-)
LOC110527666 if6 coding upstream 378443 32898346 ~ 32913140 (-)
fam83c fam83c coding upstream 422003 32941906 ~ 32950746 (-)
LOC110527668 LOC106582647 coding upstream 439956 32959859 ~ 32998873 (-)
G598430 NA non-coding downstream 18506 32499429 ~ 32500269 (-)
G598382 nfs1 non-coding downstream 37985 32469380 ~ 32480790 (-)
G598423 NA non-coding downstream 51840 32466620 ~ 32466935 (-)
G598419 NA non-coding downstream 55131 32463402 ~ 32463644 (-)
G598418 NA non-coding downstream 55398 32463139 ~ 32463377 (-)
G598570 NA non-coding upstream 203618 32723521 ~ 32723737 (-)
G598578 NA non-coding upstream 212657 32732560 ~ 32732777 (-)
G598581 NA non-coding upstream 214288 32734191 ~ 32734513 (-)
G598582 NA non-coding upstream 216408 32736311 ~ 32736761 (-)
G598584 NA non-coding upstream 221111 32741014 ~ 32741318 (-)
G598354 NA other downstream 98627 32418190 ~ 32420148 (-)
G596433 NA other downstream 1439457 31078512 ~ 31079318 (-)
G596352 NA other downstream 1582161 30936165 ~ 30936614 (-)
G596039 NA other downstream 1655455 30862857 ~ 30863320 (-)
G596094 NA other downstream 1674151 30844181 ~ 30844624 (-)
G599058 NA other upstream 718144 33237359 ~ 33239795 (-)
G599788 NA other upstream 1156176 33674546 ~ 33677297 (-)
LOC110527679 LOC106565035 other upstream 1250147 33770050 ~ 33774908 (-)
G600721 NA other upstream 2094589 34614492 ~ 34614875 (-)
G600872 NA other upstream 2445544 34965447 ~ 34966786 (-)

Expression


Co-expression Network