G598909


Basic Information

Item Value
gene id G598909
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 33101048 ~ 33101347 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU682285
agcctaCTCACTCCGTCCTTAAGACAAATATACAGAGACATCAGATGACACTTGCAGCTCTCTGTCCTAATGGGGCAgatctgatctgtttcacctgtcctccttattgtctccaccccctccaggtgtcgcttattttccccagtgtatttatccctgtgtttcctgtctctctgtgccagttcgtcttgtatgtttagtcaaaTCAACCAGATTGTTTTTACCGTACTcctttttgctattctcctttttctagtcctcccggttttgacccttgcctgtttctgtacTCTTTACCCG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU682285 True 300 lncRNA 0.45 1 33101048 33101347

Neighbor

gene id symbol gene type direction distance location
map1lc3a map1lc3a coding upstream 221306 32848895 ~ 32879742 (+)
unm_sa1614 LOC108424671 coding upstream 338432 32649541 ~ 32765702 (+)
fer1l4 LOC106582641 coding upstream 480429 32520230 ~ 32620619 (+)
LOC110527660 LOC106565032 coding upstream 581336 32488867 ~ 32519712 (+)
rbm12 rbm12 coding upstream 608644 32480936 ~ 32492404 (+)
sdc4 LOC106582650 coding downstream 103967 33205314 ~ 33215912 (+)
LOC110528943 NA coding downstream 190359 33291706 ~ 33297076 (+)
LOC110527673 LOC106582652 coding downstream 398073 33499420 ~ 33562457 (+)
or134-1 LOC106582596 coding downstream 493877 33595224 ~ 33596343 (+)
LOC110528945 LOC106582597 coding downstream 514842 33616189 ~ 33617281 (+)
G598897 NA non-coding upstream 10204 33090509 ~ 33090844 (+)
G598885 NA non-coding upstream 19473 33081174 ~ 33081575 (+)
G598714 LOC106582647 non-coding upstream 102214 32990134 ~ 32998834 (+)
G598683 NA non-coding upstream 173521 32927238 ~ 32927527 (+)
G598682 NA non-coding upstream 175325 32925414 ~ 32925723 (+)
G598929 NA non-coding downstream 16073 33117420 ~ 33122034 (+)
G598998 NA non-coding downstream 126121 33227468 ~ 33227774 (+)
G598999 NA non-coding downstream 127088 33228435 ~ 33228696 (+)
G599006 LOC106595915 non-coding downstream 133187 33234534 ~ 33235701 (+)
G599005 NA non-coding downstream 136036 33237383 ~ 33239788 (+)
LOC110531742 LOC106594194 other upstream 1091118 32007023 ~ 32013203 (+)
G596297 NA other upstream 2018758 31081721 ~ 31082290 (+)
G596168 NA other upstream 2197161 30903179 ~ 30903887 (+)
G593774 LOC106593940 other upstream 3068427 30031959 ~ 30032621 (+)
G593513 LOC106610831 other upstream 3572138 29528027 ~ 29528910 (+)
G599004 NA other downstream 134466 33235813 ~ 33236636 (+)
G599123 NA other downstream 189179 33290526 ~ 33295528 (+)
G600013 NA other downstream 864942 33966289 ~ 33966755 (+)
G600431 NA other downstream 1658000 34759347 ~ 34759658 (+)
G600531 NA other downstream 1869781 34971128 ~ 34971405 (+)

Expression


Co-expression Network