G599004



Basic Information


Item Value
gene id G599004
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 33235813 ~ 33236636 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU682386
ACTACGATAGTATTTGTACACCAACCAACAGGGAGCAAACCTAACTGTAGTATACCCCCTGTCATGTTAATACAGGAGAATTCGGCCCTGGCAACATCAGAGGAAAATACTGGTGCCCTGTCCGTAGCGGAGACAACAGGGTAAACTGCATCCCACAAGAAACAATTACCAGTCGGATTGTCTTGGTCCATAAGGGGCATTAAACATCCGATCTCGACAGTAGCCGGGACAATGCGGAGCAATGGTCGGGCACCCATGCAAACTACACAACTAGTGGGGGTTGTattggctgcttgttcggtcaaTAATAGCCAATTGTTAGACAAACCTGAGATACCTGTAGCAACCCGAATGTTCTCATCCGGGGTAGGGGTGGTGACCACTAAAACAGCAGAACCCCACCCATCCCTGTGCTGGGGCAGGGTATGTGGCTTTGCCATATCGTCACGCACCGTCACAGAAGTAGGCTGTGGTTCTGGCGTAACACAGATATATAGTGTGAAATGGACTTCAGCCCTCTCGGTATCTACATATGGGGCCAACGTAAAAACCTGACACCCCATAGTGGTTCCAGGTCGTACAATCAGCTTTAGTTGAAAACCAGTGCGTGAAAATGTAAGCCGTTTGCGCCAGGCAAGAACAACCCGTCCCTTGGAATAGCTGGACCAGTCATGCCCCGTTTCTGCCACCAAGTTTTTCCAAGACCACTCACCATATCCCCCTTTGGTTATATACCAGTTAAAACTGGAATAGGTCCAGGCAGGTAGCCCCAAACTATTTTGCGCATGACCCAAAAGGCCCCAAGGCAGGTAAACGGTGGTGGT

Function


NR:

description
uncharacterized protein LOC110493879

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU682386 True 824 TUCP 0.50 1 33235813 33236636

Neighbor


gene id symbol gene type direction distance location
sdc4 LOC106582650 coding upstream 19901 33205314 ~ 33215912 (+)
map1lc3a map1lc3a coding upstream 356071 32848895 ~ 32879742 (+)
unm_sa1614 LOC108424671 coding upstream 473197 32649541 ~ 32765702 (+)
fer1l4 LOC106582641 coding upstream 615194 32520230 ~ 32620619 (+)
LOC110527660 LOC106565032 coding upstream 716101 32488867 ~ 32519712 (+)
LOC110528943 NA coding downstream 55070 33291706 ~ 33297076 (+)
LOC110527673 LOC106582652 coding downstream 262784 33499420 ~ 33562457 (+)
or134-1 LOC106582596 coding downstream 358588 33595224 ~ 33596343 (+)
LOC110528945 LOC106582597 coding downstream 379553 33616189 ~ 33617281 (+)
LOC110528946 LOC106582609 coding downstream 386601 33623237 ~ 33624475 (+)
G599006 LOC106595915 non-coding upstream 112 33234534 ~ 33235701 (+)
G598999 NA non-coding upstream 7117 33228435 ~ 33228696 (+)
G598998 NA non-coding upstream 8039 33227468 ~ 33227774 (+)
G598929 NA non-coding upstream 113779 33117420 ~ 33122034 (+)
G598909 NA non-coding upstream 134466 33101048 ~ 33101347 (+)
G599005 NA non-coding downstream 747 33237383 ~ 33239788 (+)
G599007 NA non-coding downstream 3639 33240275 ~ 33240638 (+)
G599082 NA non-coding downstream 13360 33249996 ~ 33250503 (+)
G599098 oser1 non-coding downstream 108211 33344847 ~ 33362168 (+)
G599163 NA non-coding downstream 125720 33362356 ~ 33362706 (+)
LOC110531742 LOC106594194 other upstream 1225883 32007023 ~ 32013203 (+)
G596297 NA other upstream 2153523 31081721 ~ 31082290 (+)
G596168 NA other upstream 2331926 30903179 ~ 30903887 (+)
G593774 LOC106593940 other upstream 3203192 30031959 ~ 30032621 (+)
G593513 LOC106610831 other upstream 3706903 29528027 ~ 29528910 (+)
G599123 NA other downstream 53890 33290526 ~ 33295528 (+)
G600013 NA other downstream 729653 33966289 ~ 33966755 (+)
G600431 NA other downstream 1522711 34759347 ~ 34759658 (+)
G600531 NA other downstream 1734492 34971128 ~ 34971405 (+)
LOC110527686 LOC106582662 other downstream 3337251 36573811 ~ 36582978 (+)

Expression



Co-expression Network