G599082


Basic Information

Item Value
gene id G599082
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 33249996 ~ 33250503 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU682476
ACAAAACATTTTGCTGTGCGGCCAGGAGTTTTATTCTGTGAGCACTGTGCTACTAGGTAAAAAATCTCCCAGATAATAATTGTTGTAattgtaacagggttatattggtgattccccttgccacaTTATTGAtaaaacctctagtgactccccatcccgcatgcgggagcgtaatcatcgcctgacactaattagcataacgcaacggacataaatatccctagaaaatattcctattcatgaaaatcacaaatgaaatatattgagacacagcttagccttttgttaatcaccctgtcatctcagattttccaaatatgctttacagccaaagctagacaagcatttgtgtaagtttatcgatagcctagcatagcattttgtccagctaacagcaggtaacttggtcacggaaatcagaaaagcaatcaaattaaatcgtttacctttaaTGAGCTTcgaatgttttcactcacgagactcccagttagatagcaaatgttccttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU682476 True 508 lncRNA 0.38 1 33249996 33250503

Neighbor

gene id symbol gene type direction distance location
sdc4 LOC106582650 coding upstream 34084 33205314 ~ 33215912 (+)
map1lc3a map1lc3a coding upstream 370254 32848895 ~ 32879742 (+)
unm_sa1614 LOC108424671 coding upstream 487380 32649541 ~ 32765702 (+)
fer1l4 LOC106582641 coding upstream 629377 32520230 ~ 32620619 (+)
LOC110527660 LOC106565032 coding upstream 730284 32488867 ~ 32519712 (+)
LOC110528943 NA coding downstream 41203 33291706 ~ 33297076 (+)
LOC110527673 LOC106582652 coding downstream 248917 33499420 ~ 33562457 (+)
or134-1 LOC106582596 coding downstream 344721 33595224 ~ 33596343 (+)
LOC110528945 LOC106582597 coding downstream 365686 33616189 ~ 33617281 (+)
LOC110528946 LOC106582609 coding downstream 372734 33623237 ~ 33624475 (+)
G599007 NA non-coding upstream 9358 33240275 ~ 33240638 (+)
G599005 NA non-coding upstream 10208 33237383 ~ 33239788 (+)
G599006 LOC106595915 non-coding upstream 14295 33234534 ~ 33235701 (+)
G598999 NA non-coding upstream 21300 33228435 ~ 33228696 (+)
G598998 NA non-coding upstream 22222 33227468 ~ 33227774 (+)
G599098 oser1 non-coding downstream 94344 33344847 ~ 33362168 (+)
G599163 NA non-coding downstream 111853 33362356 ~ 33362706 (+)
G599164 NA non-coding downstream 113628 33364131 ~ 33364371 (+)
G599171 NA non-coding downstream 121536 33372039 ~ 33372279 (+)
G599177 NA non-coding downstream 128216 33378719 ~ 33378931 (+)
G599004 NA other upstream 13360 33235813 ~ 33236636 (+)
LOC110531742 LOC106594194 other upstream 1240066 32007023 ~ 32013203 (+)
G596297 NA other upstream 2167706 31081721 ~ 31082290 (+)
G596168 NA other upstream 2346109 30903179 ~ 30903887 (+)
G593774 LOC106593940 other upstream 3217375 30031959 ~ 30032621 (+)
G599123 NA other downstream 40023 33290526 ~ 33295528 (+)
G600013 NA other downstream 715786 33966289 ~ 33966755 (+)
G600431 NA other downstream 1508844 34759347 ~ 34759658 (+)
G600531 NA other downstream 1720625 34971128 ~ 34971405 (+)
LOC110527686 LOC106582662 other downstream 3323384 36573811 ~ 36582978 (+)

Expression


Co-expression Network