G599098 (oser1)


Basic Information

Item Value
gene id G599098
gene name oser1
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 33344847 ~ 33362168 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU682493
AACTGAATCTGGCCCTAGGGGTTCTAACAAGTTATTATACTTAAATAATAAAAAAGGAACAGACAATAGAGAAGCATAGCAAGAAGATACTTATAAAACAGTGGACAATGATTGTAAGAGGGCCTTTCCTTACCCATGCCAGTTCTCCTTGGGGCAGCTAAGTTTGGGCTTGGCACCCTCTAGAAAGGCTCGGCTAACCACTCTTGGAGTAATGGTCTCACAGACGTGCAGCGTAGCAGGCAAGCTTTCAGCATCTACCCGGAGCTTTTTAAAGGCAGTTTGTAGGGTCTCGTCCTCACAGTCTTTTCCTCCTTCCTCCATAGTGGGAGGAGGTTGTAGTGACCAGCCACCCAGCTCGAGTTGCATTCCAAATATCCCAGTCAAGGACAATGTTGCGTGGAGTGTGTGATGACACAGCTGACAGAGAAGGTAATGTGATCACACAGGGAGAAGATCTGATCGCCCCGTTCTTTTATAGCTCCATGGGTGATGCACTCTGCGTCTGTTTACTTTTCACGTGGATGACTTGGCTAGTTCCAGACTTTTCTTTCTCCAACATCTTGTTTACACACGAACCACTTCGCAGTGACTC

Function

symbol description
oser1 Predicted to be involved in cellular response to hydrogen peroxide. Orthologous to human OSER1 (oxidative stress responsive serine rich 1).

NR:

description
oxidative stress-responsive serine-rich protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU682493 True 592 lncRNA 0.47 4 33344847 33362168

Neighbor

gene id symbol gene type direction distance location
LOC110528943 NA coding upstream 47771 33291706 ~ 33297076 (+)
sdc4 LOC106582650 coding upstream 128935 33205314 ~ 33215912 (+)
map1lc3a map1lc3a coding upstream 465105 32848895 ~ 32879742 (+)
unm_sa1614 LOC108424671 coding upstream 582231 32649541 ~ 32765702 (+)
fer1l4 LOC106582641 coding upstream 724228 32520230 ~ 32620619 (+)
LOC110527673 LOC106582652 coding downstream 137252 33499420 ~ 33562457 (+)
or134-1 LOC106582596 coding downstream 233056 33595224 ~ 33596343 (+)
LOC110528945 LOC106582597 coding downstream 254021 33616189 ~ 33617281 (+)
LOC110528946 LOC106582609 coding downstream 261069 33623237 ~ 33624475 (+)
si:dkey-43k4.5 LOC106582653 coding downstream 288469 33650637 ~ 33654546 (+)
G599082 NA non-coding upstream 94344 33249996 ~ 33250503 (+)
G599007 NA non-coding upstream 104209 33240275 ~ 33240638 (+)
G599005 NA non-coding upstream 105059 33237383 ~ 33239788 (+)
G599006 LOC106595915 non-coding upstream 109146 33234534 ~ 33235701 (+)
G598999 NA non-coding upstream 116151 33228435 ~ 33228696 (+)
G599163 NA non-coding downstream 188 33362356 ~ 33362706 (+)
G599164 NA non-coding downstream 1963 33364131 ~ 33364371 (+)
G599171 NA non-coding downstream 9871 33372039 ~ 33372279 (+)
G599177 NA non-coding downstream 16551 33378719 ~ 33378931 (+)
G599180 NA non-coding downstream 19886 33382054 ~ 33382312 (+)
G599123 NA other upstream 49319 33290526 ~ 33295528 (+)
G599004 NA other upstream 108211 33235813 ~ 33236636 (+)
LOC110531742 LOC106594194 other upstream 1334917 32007023 ~ 32013203 (+)
G596297 NA other upstream 2262557 31081721 ~ 31082290 (+)
G596168 NA other upstream 2440960 30903179 ~ 30903887 (+)
G600013 NA other downstream 604121 33966289 ~ 33966755 (+)
G600431 NA other downstream 1397179 34759347 ~ 34759658 (+)
G600531 NA other downstream 1608960 34971128 ~ 34971405 (+)
LOC110527686 LOC106582662 other downstream 3211719 36573811 ~ 36582978 (+)
G602295 gli1 other downstream 3727456 37089624 ~ 37090756 (+)

Expression


Co-expression Network