G599473


Basic Information

Item Value
gene id G599473
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 33787701 ~ 33787972 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU682880
atacagaagatatccctatttggtaaaagaccaagtccatattatggcaagagcagctcaaataagcaaagagaaatggcaatccatcattactttaagacatgaacgtCAATAAATCCAGAACATTTCTAGAACTTtgaaaaagtttcttcaagtgcagtcacaaaaaccatcaagtgctatgatgaaactggctctcatgaggaccgcctgTAACATATACGCTGGGAGTCacgaagcaagtacagggagtgcaaATGTAAATATAACAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU682880 True 272 lncRNA 0.38 1 33787701 33787972

Neighbor

gene id symbol gene type direction distance location
si:dkey-43k4.5 LOC106582653 coding upstream 133155 33650637 ~ 33654546 (+)
LOC110528946 LOC106582609 coding upstream 163226 33623237 ~ 33624475 (+)
LOC110528945 LOC106582597 coding upstream 170420 33616189 ~ 33617281 (+)
or134-1 LOC106582596 coding upstream 191358 33595224 ~ 33596343 (+)
LOC110527673 LOC106582652 coding upstream 225244 33499420 ~ 33562457 (+)
tomm34 LOC106582656 coding downstream 13806 33801778 ~ 33807479 (+)
rims4 rims4 coding downstream 96277 33884249 ~ 33944568 (+)
LOC110517647 pcdh9 coding downstream 744004 34531976 ~ 35053552 (+)
LOC118965286 NA coding downstream 938429 34726401 ~ 34728810 (+)
LOC118965354 NA coding downstream 2218439 36006411 ~ 36024368 (+)
G599429 NA non-coding upstream 38561 33746035 ~ 33749140 (+)
G599328 NA non-coding upstream 110487 33676203 ~ 33677214 (+)
G599326 NA non-coding upstream 112555 33674773 ~ 33675146 (+)
G599379 NA non-coding upstream 119358 33668063 ~ 33668343 (+)
G599376 NA non-coding upstream 122685 33664704 ~ 33665016 (+)
G599474 NA non-coding downstream 545 33788517 ~ 33788914 (+)
G599442 LOC100136192 non-coding downstream 27734 33815706 ~ 33836048 (+)
G599504 NA non-coding downstream 70654 33858626 ~ 33859090 (+)
G599506 NA non-coding downstream 72154 33860126 ~ 33860483 (+)
G599521 NA non-coding downstream 93988 33881960 ~ 33882217 (+)
G599123 NA other upstream 492173 33290526 ~ 33295528 (+)
G599004 NA other upstream 551065 33235813 ~ 33236636 (+)
LOC110531742 LOC106594194 other upstream 1777771 32007023 ~ 32013203 (+)
G596297 NA other upstream 2705411 31081721 ~ 31082290 (+)
G596168 NA other upstream 2883814 30903179 ~ 30903887 (+)
G600013 NA other downstream 178317 33966289 ~ 33966755 (+)
G600431 NA other downstream 971375 34759347 ~ 34759658 (+)
G600531 NA other downstream 1183156 34971128 ~ 34971405 (+)
LOC110527686 LOC106582662 other downstream 2785915 36573811 ~ 36582978 (+)
G602295 gli1 other downstream 3301652 37089624 ~ 37090756 (+)

Expression


Co-expression Network