G599474


Basic Information

Item Value
gene id G599474
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 33788517 ~ 33788914 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU682881
atagaaaacactctgaagtttctaaatctgcttgaatgatgtctgtgagtataacagaactcatatggcaggtaaagtcctgagaagaaatccaaacaggaagggagaaatctgaggttggtcgattttcaacccagtccctattgaattcacagtgagatatggatgaagttgcacttcctagggcttccactagatgtcaaccgtctttagaaactggtttgaggattctactataaaggaggggctcatgagagctctttgagtcagtggtctggcagggTGTCTCAGGCTtgtgacgcgcgctcccgacagcgTTTGCTCTccttccagtgcttttcttcagacaatgaaattctccggttggaaccttattgatgatttatgttaaaaacatc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU682881 True 398 lncRNA 0.43 1 33788517 33788914

Neighbor

gene id symbol gene type direction distance location
si:dkey-43k4.5 LOC106582653 coding upstream 133971 33650637 ~ 33654546 (+)
LOC110528946 LOC106582609 coding upstream 164042 33623237 ~ 33624475 (+)
LOC110528945 LOC106582597 coding upstream 171236 33616189 ~ 33617281 (+)
or134-1 LOC106582596 coding upstream 192174 33595224 ~ 33596343 (+)
LOC110527673 LOC106582652 coding upstream 226060 33499420 ~ 33562457 (+)
tomm34 LOC106582656 coding downstream 12864 33801778 ~ 33807479 (+)
rims4 rims4 coding downstream 95335 33884249 ~ 33944568 (+)
LOC110517647 pcdh9 coding downstream 743062 34531976 ~ 35053552 (+)
LOC118965286 NA coding downstream 937487 34726401 ~ 34728810 (+)
LOC118965354 NA coding downstream 2217497 36006411 ~ 36024368 (+)
G599473 NA non-coding upstream 545 33787701 ~ 33787972 (+)
G599429 NA non-coding upstream 39377 33746035 ~ 33749140 (+)
G599328 NA non-coding upstream 111303 33676203 ~ 33677214 (+)
G599326 NA non-coding upstream 113371 33674773 ~ 33675146 (+)
G599379 NA non-coding upstream 120174 33668063 ~ 33668343 (+)
G599442 LOC100136192 non-coding downstream 26792 33815706 ~ 33836048 (+)
G599504 NA non-coding downstream 69712 33858626 ~ 33859090 (+)
G599506 NA non-coding downstream 71212 33860126 ~ 33860483 (+)
G599521 NA non-coding downstream 93046 33881960 ~ 33882217 (+)
G599551 NA non-coding downstream 162974 33951888 ~ 33952990 (+)
G599123 NA other upstream 492989 33290526 ~ 33295528 (+)
G599004 NA other upstream 551881 33235813 ~ 33236636 (+)
LOC110531742 LOC106594194 other upstream 1778587 32007023 ~ 32013203 (+)
G596297 NA other upstream 2706227 31081721 ~ 31082290 (+)
G596168 NA other upstream 2884630 30903179 ~ 30903887 (+)
G600013 NA other downstream 177375 33966289 ~ 33966755 (+)
G600431 NA other downstream 970433 34759347 ~ 34759658 (+)
G600531 NA other downstream 1182214 34971128 ~ 34971405 (+)
LOC110527686 LOC106582662 other downstream 2784973 36573811 ~ 36582978 (+)
G602295 gli1 other downstream 3300710 37089624 ~ 37090756 (+)

Expression


Co-expression Network