Gene
RNA
| Item | Value |
|---|---|
| gene id | G599506 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 33860126 ~ 33860483 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU682913 | True | 358 | lncRNA | 0.39 | 1 | 33860126 | 33860483 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tomm34 | LOC106582656 | coding | upstream | 52647 | 33801778 ~ 33807479 (+) |
| LOC118965285 | NA | coding | upstream | 60398 | 33774881 ~ 33799728 (+) |
| si:dkey-43k4.5 | LOC106582653 | coding | upstream | 205580 | 33650637 ~ 33654546 (+) |
| LOC110528946 | LOC106582609 | coding | upstream | 235651 | 33623237 ~ 33624475 (+) |
| LOC110528945 | LOC106582597 | coding | upstream | 242845 | 33616189 ~ 33617281 (+) |
| rims4 | rims4 | coding | downstream | 23766 | 33884249 ~ 33944568 (+) |
| LOC110517647 | pcdh9 | coding | downstream | 671493 | 34531976 ~ 35053552 (+) |
| LOC118965286 | NA | coding | downstream | 865918 | 34726401 ~ 34728810 (+) |
| LOC118965354 | NA | coding | downstream | 2145928 | 36006411 ~ 36024368 (+) |
| LOC110527683 | LOC106582660 | coding | downstream | 2609833 | 36470316 ~ 36536037 (+) |
| G599504 | NA | non-coding | upstream | 1036 | 33858626 ~ 33859090 (+) |
| G599442 | LOC100136192 | non-coding | upstream | 24078 | 33815706 ~ 33836048 (+) |
| G599474 | NA | non-coding | upstream | 71212 | 33788517 ~ 33788914 (+) |
| G599473 | NA | non-coding | upstream | 72154 | 33787701 ~ 33787972 (+) |
| G599429 | NA | non-coding | upstream | 110986 | 33746035 ~ 33749140 (+) |
| G599521 | NA | non-coding | downstream | 21477 | 33881960 ~ 33882217 (+) |
| G599551 | NA | non-coding | downstream | 91405 | 33951888 ~ 33952990 (+) |
| G600014 | NA | non-coding | downstream | 106818 | 33967301 ~ 33967515 (+) |
| G600015 | NA | non-coding | downstream | 107413 | 33967896 ~ 33968108 (+) |
| G600032 | NA | non-coding | downstream | 119405 | 33979888 ~ 33980986 (+) |
| G599123 | NA | other | upstream | 564598 | 33290526 ~ 33295528 (+) |
| G599004 | NA | other | upstream | 623490 | 33235813 ~ 33236636 (+) |
| LOC110531742 | LOC106594194 | other | upstream | 1850196 | 32007023 ~ 32013203 (+) |
| G596297 | NA | other | upstream | 2777836 | 31081721 ~ 31082290 (+) |
| G596168 | NA | other | upstream | 2956239 | 30903179 ~ 30903887 (+) |
| G600013 | NA | other | downstream | 105806 | 33966289 ~ 33966755 (+) |
| G600431 | NA | other | downstream | 898864 | 34759347 ~ 34759658 (+) |
| G600531 | NA | other | downstream | 1110645 | 34971128 ~ 34971405 (+) |
| LOC110527686 | LOC106582662 | other | downstream | 2713404 | 36573811 ~ 36582978 (+) |
| G602295 | gli1 | other | downstream | 3229141 | 37089624 ~ 37090756 (+) |
