G599551


Basic Information

Item Value
gene id G599551
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 33951888 ~ 33952990 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU682958
ggccagttcgtacaaTAAGGACGCAAGGCGAGACCCAGtttcagacacaggaggcagatggttcgagtcttTGTTGTTTATTTAATCCAaaagtaggcaagagaatggtcgtggacaggcaaatgGTCAAAAACAGATTCCAGGAGGAGAGTCCAAGAGGtaaagagtggcagacaggctagATGTCATGGCAGGCAGaagggtcaggcaggcgggtacggagtccagaaaaaacaggcaagggtcaaaactgggaaGACTAGAAAAAGAGAATGGAGAACAGGAGTatgggaaaaacacactggttgacttgaaaacatacaagacaaactggcacagagagacaggaaacacagggataaatacactgggaaaaATAAGCGACagctggaggaggtggagacaatcacaagaacaggtgaaacagatcagggcgtgacaagaatAATGTAATACATCGATAGAATGAAGGATACAATCTAGAAAATGCAATAAAATTGAAGTATGTTCTTGGCCATTGCACGCTCgtaaggaaatagaaagctgtgaaaatgACCAAATAAGATTTGGTCATTTGAcactgataagatttcagttctGCTTGGAGCCACATTTTATGTAGCACCTCTACAGAAGGTCACTAACTACACATTCAAATTCTTTCAAGATCCTGAAAGAAATAattttctccactcctcttcccgaATCAAAATGTACACTTGCATTTTTCCTATTTCACACGTGTGAATTGGACATTCGTTTTTTTGCGTATTCTACTCCCCATGAGAGTGGGGTCAGAGCtagggatcagccattattgatggcgaccctggagcaattgggattaattgccttgctcatgggcacatcggcagatttttcacctagtctactctGGGATATGAATCtgtgacctttcggttacaggcccaaTGCTTCTAACCGCTAGCaaaggttatagacctacagtcagtgtccagatttcagtttccatttaacccacctgaacagtaggctacagttcccaTGATGTGCCATAGGCCTTTTATAAGTACCTGTCTTGTGACTGTCAAATttgtatagcgcctcacaatcattagaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU682958 True 1103 lncRNA 0.43 1 33951888 33952990

Neighbor

gene id symbol gene type direction distance location
rims4 rims4 coding upstream 7320 33884249 ~ 33944568 (+)
tomm34 LOC106582656 coding upstream 144409 33801778 ~ 33807479 (+)
LOC118965285 NA coding upstream 152160 33774881 ~ 33799728 (+)
si:dkey-43k4.5 LOC106582653 coding upstream 297342 33650637 ~ 33654546 (+)
LOC110528946 LOC106582609 coding upstream 327413 33623237 ~ 33624475 (+)
LOC110517647 pcdh9 coding downstream 578986 34531976 ~ 35053552 (+)
LOC118965286 NA coding downstream 773411 34726401 ~ 34728810 (+)
LOC118965354 NA coding downstream 2053421 36006411 ~ 36024368 (+)
LOC110527683 LOC106582660 coding downstream 2517326 36470316 ~ 36536037 (+)
LOC110527684 NA coding downstream 2558004 36510994 ~ 36517194 (+)
G599521 NA non-coding upstream 69671 33881960 ~ 33882217 (+)
G599506 NA non-coding upstream 91405 33860126 ~ 33860483 (+)
G599504 NA non-coding upstream 92798 33858626 ~ 33859090 (+)
G599442 LOC100136192 non-coding upstream 115840 33815706 ~ 33836048 (+)
G599474 NA non-coding upstream 162974 33788517 ~ 33788914 (+)
G600014 NA non-coding downstream 14311 33967301 ~ 33967515 (+)
G600015 NA non-coding downstream 14906 33967896 ~ 33968108 (+)
G600032 NA non-coding downstream 26898 33979888 ~ 33980986 (+)
G600039 NA non-coding downstream 30612 33983602 ~ 33984120 (+)
G600041 NA non-coding downstream 34600 33987590 ~ 33987789 (+)
G599123 NA other upstream 656360 33290526 ~ 33295528 (+)
G599004 NA other upstream 715252 33235813 ~ 33236636 (+)
LOC110531742 LOC106594194 other upstream 1941958 32007023 ~ 32013203 (+)
G596297 NA other upstream 2869598 31081721 ~ 31082290 (+)
G596168 NA other upstream 3048001 30903179 ~ 30903887 (+)
G600013 NA other downstream 13299 33966289 ~ 33966755 (+)
G600431 NA other downstream 806357 34759347 ~ 34759658 (+)
G600531 NA other downstream 1018138 34971128 ~ 34971405 (+)
LOC110527686 LOC106582662 other downstream 2620897 36573811 ~ 36582978 (+)
G602295 gli1 other downstream 3136634 37089624 ~ 37090756 (+)

Expression


Co-expression Network