G600015


Basic Information

Item Value
gene id G600015
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 33967896 ~ 33968108 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU683459
gcccaagcctccccagcttctcctttacccaaatccagatagcagatgttctgaaagagctgaaaaacctggacccgtacaaatcagctgggcttgacaatctggaccctctatttctgaaactatccgccgccattgtcgcaacccctattaccagcctgttcaacctctctttcatatcgtctgagatccccaaggactggaaagctgccg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU683459 True 213 lncRNA 0.51 1 33967896 33968108

Neighbor

gene id symbol gene type direction distance location
rims4 rims4 coding upstream 23328 33884249 ~ 33944568 (+)
tomm34 LOC106582656 coding upstream 160417 33801778 ~ 33807479 (+)
LOC118965285 NA coding upstream 168168 33774881 ~ 33799728 (+)
si:dkey-43k4.5 LOC106582653 coding upstream 313350 33650637 ~ 33654546 (+)
LOC110528946 LOC106582609 coding upstream 343421 33623237 ~ 33624475 (+)
LOC110517647 pcdh9 coding downstream 563868 34531976 ~ 35053552 (+)
LOC118965286 NA coding downstream 758293 34726401 ~ 34728810 (+)
LOC118965354 NA coding downstream 2038303 36006411 ~ 36024368 (+)
LOC110527683 LOC106582660 coding downstream 2502208 36470316 ~ 36536037 (+)
LOC110527684 NA coding downstream 2542886 36510994 ~ 36517194 (+)
G600014 NA non-coding upstream 381 33967301 ~ 33967515 (+)
G599551 NA non-coding upstream 14906 33951888 ~ 33952990 (+)
G599521 NA non-coding upstream 85679 33881960 ~ 33882217 (+)
G599506 NA non-coding upstream 107413 33860126 ~ 33860483 (+)
G599504 NA non-coding upstream 108806 33858626 ~ 33859090 (+)
G600032 NA non-coding downstream 11780 33979888 ~ 33980986 (+)
G600039 NA non-coding downstream 15494 33983602 ~ 33984120 (+)
G600041 NA non-coding downstream 19482 33987590 ~ 33987789 (+)
G600047 NA non-coding downstream 29117 33997225 ~ 34003353 (+)
G600067 NA non-coding downstream 55842 34023950 ~ 34024291 (+)
G600013 NA other upstream 1141 33966289 ~ 33966755 (+)
G599123 NA other upstream 672368 33290526 ~ 33295528 (+)
G599004 NA other upstream 731260 33235813 ~ 33236636 (+)
LOC110531742 LOC106594194 other upstream 1957966 32007023 ~ 32013203 (+)
G596297 NA other upstream 2885606 31081721 ~ 31082290 (+)
G600431 NA other downstream 791239 34759347 ~ 34759658 (+)
G600531 NA other downstream 1003020 34971128 ~ 34971405 (+)
LOC110527686 LOC106582662 other downstream 2605779 36573811 ~ 36582978 (+)
G602295 gli1 other downstream 3121516 37089624 ~ 37090756 (+)
G604207 NA other downstream 4530923 38499031 ~ 38499662 (+)

Expression


Co-expression Network