G600079


Basic Information

Item Value
gene id G600079
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 34033661 ~ 34033927 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU683525
gacttttgtaattttaaaaagtgacgttgcgtcttgtaaatgggcttttcgcagcatcagactggccttcagcaaatgacattttgggtatacaatgacggatttaatcgggaaaaagacccaattgtgatgtttatgggacatataggagtgccaacaaagaagctcgtccaaggtaattaatgttttatattttatttctgcgttttgggtagcgccggctaccgcaaaatctgttgtttacgtgtcgtgctgttATTTTGGGGg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU683525 True 267 lncRNA 0.40 1 34033661 34033927

Neighbor

gene id symbol gene type direction distance location
rims4 rims4 coding upstream 89093 33884249 ~ 33944568 (+)
tomm34 LOC106582656 coding upstream 226182 33801778 ~ 33807479 (+)
LOC118965285 NA coding upstream 233933 33774881 ~ 33799728 (+)
si:dkey-43k4.5 LOC106582653 coding upstream 379115 33650637 ~ 33654546 (+)
LOC110528946 LOC106582609 coding upstream 409186 33623237 ~ 33624475 (+)
LOC110517647 pcdh9 coding downstream 498049 34531976 ~ 35053552 (+)
LOC118965286 NA coding downstream 692474 34726401 ~ 34728810 (+)
LOC118965354 NA coding downstream 1972484 36006411 ~ 36024368 (+)
LOC110527683 LOC106582660 coding downstream 2436389 36470316 ~ 36536037 (+)
LOC110527684 NA coding downstream 2477067 36510994 ~ 36517194 (+)
G600067 NA non-coding upstream 9370 34023950 ~ 34024291 (+)
G600047 NA non-coding upstream 30308 33997225 ~ 34003353 (+)
G600041 NA non-coding upstream 45872 33987590 ~ 33987789 (+)
G600039 NA non-coding upstream 49541 33983602 ~ 33984120 (+)
G600032 NA non-coding upstream 52675 33979888 ~ 33980986 (+)
G600081 NA non-coding downstream 586 34034513 ~ 34034773 (+)
G600089 NA non-coding downstream 9525 34043452 ~ 34044653 (+)
G600090 NA non-coding downstream 10757 34044684 ~ 34044935 (+)
G600093 NA non-coding downstream 23653 34057580 ~ 34058001 (+)
G600094 NA non-coding downstream 24259 34058186 ~ 34091029 (+)
G600013 NA other upstream 66906 33966289 ~ 33966755 (+)
G599123 NA other upstream 738133 33290526 ~ 33295528 (+)
G599004 NA other upstream 797025 33235813 ~ 33236636 (+)
LOC110531742 LOC106594194 other upstream 2023731 32007023 ~ 32013203 (+)
G596297 NA other upstream 2951371 31081721 ~ 31082290 (+)
G600431 NA other downstream 725420 34759347 ~ 34759658 (+)
G600531 NA other downstream 937201 34971128 ~ 34971405 (+)
LOC110527686 LOC106582662 other downstream 2539960 36573811 ~ 36582978 (+)
G602295 gli1 other downstream 3055697 37089624 ~ 37090756 (+)
G604207 NA other downstream 4465104 38499031 ~ 38499662 (+)

Expression


Co-expression Network