XLOC_025316 (dre-mir-152)


Basic Information

Item Value
gene id XLOC_025316
gene name dre-mir-152
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 24095957 ~ 24096036 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00049975
CTGTTCACCTGGCTCAAGTTCTGTGATACACTCAGACTTTGAATCAGTGGTAGTCAGTGCATGACAGAACTTTGGCCCGG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000080838

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00049975 True 80 miRNA 0.49 1 24095957 24096036

Neighbor

gene id symbol gene type direction distance location
XLOC_025314 cbx1a coding upstream 24375 24050043 ~ 24071582 (+)
XLOC_025313 NA coding upstream 127991 23930446 ~ 23967966 (+)
XLOC_025312 hoxb2a coding upstream 341126 23752150 ~ 23754831 (+)
XLOC_025310 hoxb4a coding upstream 371975 23710839 ~ 23723982 (+)
XLOC_025317 NA coding downstream 25165 24121201 ~ 24133485 (+)
XLOC_025318 si:ch211-246i5.5 coding downstream 38382 24134418 ~ 24145250 (+)
XLOC_025319 CR790362.1 coding downstream 65833 24161869 ~ 24184426 (+)
XLOC_025320 prr15la coding downstream 93768 24189804 ~ 24197270 (+)
XLOC_025321 atf4b coding downstream 101898 24197934 ~ 24200819 (+)
XLOC_025429 BX649540.1 misc downstream 6152703 30248739 ~ 30249036 (+)
XLOC_025311 dre-mir-10c non-coding upstream 375212 23720651 ~ 23720745 (+)
XLOC_025303 mir196b non-coding upstream 422502 23673377 ~ 23673455 (+)
XLOC_025301 NA non-coding upstream 427760 23665161 ~ 23668197 (+)
XLOC_025299 NA non-coding upstream 479156 23604478 ~ 23616801 (+)
XLOC_025323 NA non-coding downstream 121152 24217188 ~ 24217511 (+)
XLOC_025327 NA non-coding downstream 342561 24438597 ~ 24452013 (+)
XLOC_025342 NA non-coding downstream 834544 24930580 ~ 24936255 (+)
XLOC_025307 hoxb3a coding upstream 324012 23697997 ~ 23771945 (+)

Expression


Co-expression Network