G600203


Basic Information

Item Value
gene id G600203
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 34235319 ~ 34236008 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU683660
gaatacagactcaagctcattaccataacgcaacgttaactattcatgaaaatcgcaaatgaaatgaaataaatatgccatctctcaagcttagccttttgtaaacaacactgtcatctcagattttcaaaatatgcttctcaaccataggaaaacaataatttgtgtaaaagtagctagctagcgtagcatttagcgttagcattagcatccagcacgcaacatttcaacaaaaacataaaagccttcaaataaaatcatttacctttgaagaacttctgatgttttcaatgaggatactctcagttagatagcagatgctcagtttttccaaaaagattctttgtgtattagaaatagctccgttttatacatcacatttggctaccaaaaaaaaccgaaaattcagtcctcaaaacgcaaacttttttccaaattaactccataatatcgactgaaaacatggcaaacgttgtttagaatcaatcctcaaggtgtttttcacatatctcttcattgatatatcgttcttggaagcatggtttctcccctcaatcaaatggaaaagtacaagcagctggcaattgcgcaccaaATTCCACGCAgaacaccaggcggacacttggaaaatgtagtctcttatggtcaatcttccaatgatatgcctacaaatacgtcacaatgctgcta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU683660 True 690 lncRNA 0.36 1 34235319 34236008
Loading

Neighbor

gene id symbol gene type direction distance location
abraa LOC106582659 coding downstream 276994 33951832 ~ 33958325 (-)
ywhaba LOC100136192 coding downstream 399461 33817223 ~ 33835858 (-)
LOC110527679 LOC106565035 coding downstream 460411 33770050 ~ 33774908 (-)
LOC110527676 stk4 coding downstream 488619 33677344 ~ 33746700 (-)
LOC118965409 NA coding downstream 734058 33501207 ~ 33501261 (-)
LOC118965352 NA coding upstream 863399 35099407 ~ 35200098 (-)
LOC118965353 NA coding upstream 1376381 35612389 ~ 35612805 (-)
LOC110527685 LOC106582661 coding upstream 2302130 36538138 ~ 36559214 (-)
LOC110528947 LOC106582664 coding upstream 2502683 36738691 ~ 36858144 (-)
LOC110527694 LOC106582668 coding upstream 2795266 37031274 ~ 37038809 (-)
G600185 NA non-coding downstream 81036 34153335 ~ 34154283 (-)
G600168 NA non-coding downstream 103023 34095752 ~ 34132296 (-)
G600159 NA non-coding downstream 164154 34069142 ~ 34071165 (-)
G600148 NA non-coding downstream 193265 34041764 ~ 34042054 (-)
G600088 NA non-coding downstream 196092 34038539 ~ 34039227 (-)
G600205 NA non-coding upstream 28566 34264574 ~ 34264791 (-)
G600207 NA non-coding upstream 45907 34281915 ~ 34282115 (-)
G600209 NA non-coding upstream 53643 34289651 ~ 34289856 (-)
G600210 NA non-coding upstream 55424 34291432 ~ 34291644 (-)
G600219 NA non-coding upstream 70002 34306010 ~ 34306296 (-)
G599788 NA other downstream 558022 33674546 ~ 33677297 (-)
G599058 NA other downstream 995524 33237359 ~ 33239795 (-)
G598354 NA other downstream 1815171 32418190 ~ 32420148 (-)
G596433 NA other downstream 3156001 31078512 ~ 31079318 (-)
G600721 NA other upstream 378484 34614492 ~ 34614875 (-)
G600872 NA other upstream 729439 34965447 ~ 34966786 (-)
G600881 NA other upstream 765872 35001880 ~ 35055228 (-)
G601245 NA other upstream 1524691 35760699 ~ 35761270 (-)
G604485 NA other upstream 4353147 38589155 ~ 38597519 (-)

Expression

G600203 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 12.
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G600203 Expression in each Bioproject

Bar chart with 18 bars.
G600203 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
End of interactive chart.

Co-expression Network