XLOC_002532


Basic Information

Item Value
gene id XLOC_002532
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 4032478 ~ 4046317 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005744
CGAATAGTTGTGTTAAAAATATCACGACACATGTCAACGGAAATTGAATATCAGCCAAAGAAGGCGttaaatagatataaaataaGATATACAACAAAGCGTTCCCTTGGAAATGAAGTGTAGCAGAACCCTCAGGGCATCTCTGGCTTTCTCTGGATGCTGCAGGATCTCAGCCAGAGCCTGACCAATAAGAGATGACGGGCTGTTCAGTTTCACATCACTCCCAATCAGCATAAAGCCTGAGGAGACATTCAAATCATGAGGAGGACAGCAAACACAtcttaaaatgtacagtatactCTTC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005744 True 304 lncRNA 0.41 2 4032478 4046317

Neighbor

gene id symbol gene type direction distance location
XLOC_002531 NA coding downstream 75629 3954090 ~ 3956849 (-)
XLOC_002530 FP236598.1 coding downstream 263712 3768651 ~ 3768766 (-)
XLOC_002529 CU571170.1 coding downstream 525824 3506540 ~ 3506654 (-)
XLOC_002528 tmed2 coding downstream 604848 3419832 ~ 3427630 (-)
XLOC_002527 ddx55 coding downstream 616220 3397871 ~ 3416258 (-)
XLOC_002534 NA coding upstream 49554 4095871 ~ 4099183 (-)
XLOC_002535 grin3a coding upstream 233204 4279521 ~ 4316015 (-)
XLOC_002536 CABZ01073795.1 coding upstream 321113 4367430 ~ 4375190 (-)
XLOC_002537 NA coding upstream 462072 4508389 ~ 4577852 (-)
XLOC_002538 NA coding upstream 527237 4573554 ~ 4583020 (-)
XLOC_002525 NA non-coding downstream 700116 3322137 ~ 3332362 (-)
XLOC_002518 NA non-coding downstream 1133174 2897979 ~ 2899304 (-)
XLOC_002539 NA non-coding upstream 765987 4812304 ~ 4818606 (-)
XLOC_002540 NA non-coding upstream 873006 4919323 ~ 4922051 (-)

Expression


Co-expression Network