G600332


Basic Information

Item Value
gene id G600332
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 34543343 ~ 34544659 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU683825
TCAGAacccctactctgagacgctgtgTGAATCCAGGCCTTTGATCCCAAATCAGAacccctactctgagacgctgtgTGAATCCAGGCCTTTGATCCCAAATCAGAACCCCTACTCAGAGACGCTGTGTGAATCCAGGCCTTTGATCCCAAATCAGAACCACACACTCTGAGACGCTGTGTGAATCCAGGCCTTTGATCCCAAATCAGAacccctactctgagacgctgtgTGAATCCAGGCCTTTGATCCCAAATCAGAACCACACACTCTGAGACGCTGTGTGAATCCAGGCCTTTGATCCCAAATCAGAACCACACACTCTGAGACGCTGTGTGAATCCAGGCCATTGATCAAGGAACCCAACAGTTCTCATATACACTGTCTGTTAGTCAAGACAGCTGACTAGCAATATCTTGTGAGGTTGGTGGTCTTGTGATGCCAACGTCATGGGTTCAAACCCCAACACGGACAACATATACATGCTAAACGTGTAGCTATGTATATATTCACTGTAAGTCAACATTAAACCCACAGAATATTAATAGTGAACAACATTAAACCCACAGAATATTAATAGTGAACAATATTAAACCCACAGaatatggtctaaagtagtgcactacagagggtagtagggtgctatttgggatgctaCTGAGCCATCCTTCCTTGACTACATTAAAAAGATACGATTAGAGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU683825 True 704 lncRNA 0.45 2 34543343 34544659
Loading

Neighbor

gene id symbol gene type direction distance location
rims4 rims4 coding upstream 598775 33884249 ~ 33944568 (+)
tomm34 LOC106582656 coding upstream 735864 33801778 ~ 33807479 (+)
LOC118965285 NA coding upstream 743615 33774881 ~ 33799728 (+)
si:dkey-43k4.5 LOC106582653 coding upstream 888797 33650637 ~ 33654546 (+)
LOC110528946 LOC106582609 coding upstream 918868 33623237 ~ 33624475 (+)
LOC118965286 NA coding downstream 181742 34726401 ~ 34728810 (+)
LOC118965354 NA coding downstream 1461752 36006411 ~ 36024368 (+)
LOC110527683 LOC106582660 coding downstream 1925657 36470316 ~ 36536037 (+)
LOC110527684 NA coding downstream 1966335 36510994 ~ 36517194 (+)
LOC110527686 LOC106582662 coding downstream 2029152 36573811 ~ 36582978 (+)
G600329 NA non-coding upstream 2642 34539622 ~ 34540701 (+)
G600327 NA non-coding upstream 4738 34537349 ~ 34538605 (+)
G600316 NA non-coding upstream 17214 34525793 ~ 34526129 (+)
G600311 NA non-coding upstream 28693 34514352 ~ 34514650 (+)
G600304 NA non-coding upstream 50971 34491733 ~ 34492372 (+)
G600323 NA non-coding downstream 561 34545220 ~ 34547805 (+)
G600321 NA non-coding downstream 6319 34550978 ~ 34551302 (+)
G600342 NA non-coding downstream 34855 34579514 ~ 34629446 (+)
G600345 NA non-coding downstream 41400 34586059 ~ 34641075 (+)
G600346 NA non-coding downstream 42361 34587020 ~ 34588441 (+)
G600013 NA other upstream 576588 33966289 ~ 33966755 (+)
G599123 NA other upstream 1247815 33290526 ~ 33295528 (+)
G599004 NA other upstream 1306707 33235813 ~ 33236636 (+)
LOC110531742 LOC106594194 other upstream 2533413 32007023 ~ 32013203 (+)
G596297 NA other upstream 3461053 31081721 ~ 31082290 (+)
G600431 NA other downstream 214688 34759347 ~ 34759658 (+)
G600531 NA other downstream 426469 34971128 ~ 34971405 (+)
G602295 gli1 other downstream 2544965 37089624 ~ 37090756 (+)
G604207 NA other downstream 3954372 38499031 ~ 38499662 (+)

Expression

G600332 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 10.
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G600332 Expression in each Bioproject

Bar chart with 13 bars.
G600332 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
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Co-expression Network