Item | Value |
---|---|
gene id | G600881 |
gene name | NA |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048571.1 |
NCBI id | CM023225.2 |
chromosome length | 90918291 |
location | 35001880 ~ 35055228 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
id | description |
---|
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU684541 | False | 388 | lncRNA | 0.51 | 2 | 35001880 | 35002693 |
TU684544 | False | 727 | TUCP | 0.48 | 4 | 35001880 | 35055228 |
TU684542 | False | 614 | TUCP | 0.49 | 3 | 35002480 | 35055133 |
TU684545 | False | 441 | lncRNA | 0.48 | 2 | 35019451 | 35055133 |
TU684535 | False | 512 | lncRNA | 0.41 | 3 | 35054087 | 35055228 |
TU684538 | True | 677 | lncRNA | 0.43 | 3 | 35054087 | 35055228 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
abraa | LOC106582659 | coding | downstream | 1043555 | 33951832 ~ 33958325 (-) |
ywhaba | LOC100136192 | coding | downstream | 1166022 | 33817223 ~ 33835858 (-) |
LOC110527679 | LOC106565035 | coding | downstream | 1226972 | 33770050 ~ 33774908 (-) |
LOC110527676 | stk4 | coding | downstream | 1255180 | 33677344 ~ 33746700 (-) |
LOC118965409 | NA | coding | downstream | 1500619 | 33501207 ~ 33501261 (-) |
LOC118965352 | NA | coding | upstream | 44179 | 35099407 ~ 35200098 (-) |
LOC118965353 | NA | coding | upstream | 557161 | 35612389 ~ 35612805 (-) |
LOC110527685 | LOC106582661 | coding | upstream | 1482910 | 36538138 ~ 36559214 (-) |
LOC110528947 | LOC106582664 | coding | upstream | 1683463 | 36738691 ~ 36858144 (-) |
LOC110527694 | LOC106582668 | coding | upstream | 1976046 | 37031274 ~ 37038809 (-) |
G600875 | NA | non-coding | downstream | 22454 | 34978035 ~ 34979426 (-) |
G600873 | NA | non-coding | downstream | 32232 | 34967649 ~ 34969648 (-) |
G600869 | NA | non-coding | downstream | 43396 | 34958281 ~ 34958484 (-) |
G600867 | NA | non-coding | downstream | 54268 | 34947343 ~ 34947612 (-) |
G600862 | NA | non-coding | downstream | 64608 | 34936599 ~ 34937272 (-) |
G600901 | NA | non-coding | upstream | 16696 | 35071924 ~ 35072179 (-) |
G600905 | NA | non-coding | upstream | 78901 | 35134129 ~ 35134340 (-) |
G600912 | NA | non-coding | upstream | 95121 | 35150349 ~ 35150980 (-) |
G600913 | NA | non-coding | upstream | 98050 | 35153278 ~ 35153577 (-) |
G600917 | NA | non-coding | upstream | 104781 | 35160009 ~ 35160209 (-) |
G600872 | NA | other | downstream | 35094 | 34965447 ~ 34966786 (-) |
G600721 | NA | other | downstream | 387005 | 34614492 ~ 34614875 (-) |
G599788 | NA | other | downstream | 1324583 | 33674546 ~ 33677297 (-) |
G599058 | NA | other | downstream | 1762085 | 33237359 ~ 33239795 (-) |
G601245 | NA | other | upstream | 705471 | 35760699 ~ 35761270 (-) |
G604485 | NA | other | upstream | 3533927 | 38589155 ~ 38597519 (-) |
G604484 | NA | other | upstream | 3534189 | 38584293 ~ 38639400 (-) |
LOC110527723 | LOC106582696 | other | upstream | 4007777 | 39063005 ~ 39123578 (-) |
G606135 | NA | other | upstream | 4783663 | 39838891 ~ 39841331 (-) |