Gene
RNA
| Item | Value |
|---|---|
| gene id | G601355 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 35930516 ~ 35930839 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU685116 | True | 324 | lncRNA | 0.51 | 1 | 35930516 | 35930839 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110517647 | pcdh9 | coding | upstream | 876964 | 34531976 ~ 35053552 (+) |
| LOC118965286 | NA | coding | upstream | 1201706 | 34726401 ~ 34728810 (+) |
| rims4 | rims4 | coding | upstream | 1985948 | 33884249 ~ 33944568 (+) |
| tomm34 | LOC106582656 | coding | upstream | 2123037 | 33801778 ~ 33807479 (+) |
| LOC118965285 | NA | coding | upstream | 2130788 | 33774881 ~ 33799728 (+) |
| LOC118965354 | NA | coding | downstream | 75572 | 36006411 ~ 36024368 (+) |
| LOC110527683 | LOC106582660 | coding | downstream | 539477 | 36470316 ~ 36536037 (+) |
| LOC110527684 | NA | coding | downstream | 580155 | 36510994 ~ 36517194 (+) |
| LOC110527686 | LOC106582662 | coding | downstream | 642972 | 36573811 ~ 36582978 (+) |
| LOC110527688 | LOC106582663 | coding | downstream | 737962 | 36668801 ~ 36679505 (+) |
| G601354 | NA | non-coding | upstream | 4325 | 35925977 ~ 35926191 (+) |
| G601334 | NA | non-coding | upstream | 30618 | 35899214 ~ 35899898 (+) |
| G601321 | NA | non-coding | upstream | 50800 | 35879388 ~ 35879716 (+) |
| G601317 | NA | non-coding | upstream | 55730 | 35873724 ~ 35874786 (+) |
| G601316 | NA | non-coding | upstream | 58015 | 35872211 ~ 35872501 (+) |
| G601358 | NA | non-coding | downstream | 4223 | 35935062 ~ 35935291 (+) |
| G601359 | NA | non-coding | downstream | 4893 | 35935732 ~ 35937338 (+) |
| G601361 | NA | non-coding | downstream | 34160 | 35964999 ~ 35965624 (+) |
| G601368 | NA | non-coding | downstream | 43741 | 35974580 ~ 35974916 (+) |
| G601372 | NA | non-coding | downstream | 59030 | 35989869 ~ 35990400 (+) |
| G600531 | NA | other | upstream | 959111 | 34971128 ~ 34971405 (+) |
| G600431 | NA | other | upstream | 1170858 | 34759347 ~ 34759658 (+) |
| G600013 | NA | other | upstream | 1963761 | 33966289 ~ 33966755 (+) |
| G599123 | NA | other | upstream | 2634988 | 33290526 ~ 33295528 (+) |
| G599004 | NA | other | upstream | 2693880 | 33235813 ~ 33236636 (+) |
| G602295 | gli1 | other | downstream | 1158785 | 37089624 ~ 37090756 (+) |
| G604207 | NA | other | downstream | 2568192 | 38499031 ~ 38499662 (+) |
| G604258 | NA | other | downstream | 2653635 | 38584474 ~ 38594822 (+) |
| G606400 | LOC105027254 | other | downstream | 4195695 | 40126534 ~ 40141972 (+) |
