G601358


Basic Information

Item Value
gene id G601358
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 35935062 ~ 35935291 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU685119
ggttctgtcagacctgggctctgaccgttaaccacaggttctgtcagacctgggctctgaccgttaaccacaggttctgtcagacctgggctctgaccgttaatcacaggttctgtcagacctgggctctgaccgttaaccacaggttctgtcagacctgggctctgaccgttaaccacaggttctgtcagacctgggctcttaccgttaaccacaggttctgtcagacc

Function

NR:

description
PREDICTED: nuclear receptor coactivator 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU685119 True 230 lncRNA 0.55 1 35935062 35935291

Neighbor

gene id symbol gene type direction distance location
LOC110517647 pcdh9 coding upstream 881510 34531976 ~ 35053552 (+)
LOC118965286 NA coding upstream 1206252 34726401 ~ 34728810 (+)
rims4 rims4 coding upstream 1990494 33884249 ~ 33944568 (+)
tomm34 LOC106582656 coding upstream 2127583 33801778 ~ 33807479 (+)
LOC118965285 NA coding upstream 2135334 33774881 ~ 33799728 (+)
LOC118965354 NA coding downstream 71120 36006411 ~ 36024368 (+)
LOC110527683 LOC106582660 coding downstream 535025 36470316 ~ 36536037 (+)
LOC110527684 NA coding downstream 575703 36510994 ~ 36517194 (+)
LOC110527686 LOC106582662 coding downstream 638520 36573811 ~ 36582978 (+)
LOC110527688 LOC106582663 coding downstream 733510 36668801 ~ 36679505 (+)
G601355 NA non-coding upstream 4223 35930516 ~ 35930839 (+)
G601354 NA non-coding upstream 8871 35925977 ~ 35926191 (+)
G601334 NA non-coding upstream 35164 35899214 ~ 35899898 (+)
G601321 NA non-coding upstream 55346 35879388 ~ 35879716 (+)
G601317 NA non-coding upstream 60276 35873724 ~ 35874786 (+)
G601359 NA non-coding downstream 441 35935732 ~ 35937338 (+)
G601361 NA non-coding downstream 29708 35964999 ~ 35965624 (+)
G601368 NA non-coding downstream 39289 35974580 ~ 35974916 (+)
G601372 NA non-coding downstream 54578 35989869 ~ 35990400 (+)
G601377 NA non-coding downstream 60773 35996064 ~ 35996639 (+)
G600531 NA other upstream 963657 34971128 ~ 34971405 (+)
G600431 NA other upstream 1175404 34759347 ~ 34759658 (+)
G600013 NA other upstream 1968307 33966289 ~ 33966755 (+)
G599123 NA other upstream 2639534 33290526 ~ 33295528 (+)
G599004 NA other upstream 2698426 33235813 ~ 33236636 (+)
G602295 gli1 other downstream 1154333 37089624 ~ 37090756 (+)
G604207 NA other downstream 2563740 38499031 ~ 38499662 (+)
G604258 NA other downstream 2649183 38584474 ~ 38594822 (+)
G606400 LOC105027254 other downstream 4191243 40126534 ~ 40141972 (+)

Expression


Co-expression Network