Gene
RNA
| Item | Value |
|---|---|
| gene id | G601361 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 35964999 ~ 35965624 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU685124 | False | 301 | lncRNA | 0.44 | 3 | 35964999 | 35965624 |
| TU685123 | True | 253 | lncRNA | 0.43 | 2 | 35965297 | 35965624 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110517647 | pcdh9 | coding | upstream | 911447 | 34531976 ~ 35053552 (+) |
| LOC118965286 | NA | coding | upstream | 1236189 | 34726401 ~ 34728810 (+) |
| rims4 | rims4 | coding | upstream | 2020431 | 33884249 ~ 33944568 (+) |
| tomm34 | LOC106582656 | coding | upstream | 2157520 | 33801778 ~ 33807479 (+) |
| LOC118965285 | NA | coding | upstream | 2165271 | 33774881 ~ 33799728 (+) |
| LOC118965354 | NA | coding | downstream | 40787 | 36006411 ~ 36024368 (+) |
| LOC110527683 | LOC106582660 | coding | downstream | 504692 | 36470316 ~ 36536037 (+) |
| LOC110527684 | NA | coding | downstream | 545370 | 36510994 ~ 36517194 (+) |
| LOC110527686 | LOC106582662 | coding | downstream | 608187 | 36573811 ~ 36582978 (+) |
| LOC110527688 | LOC106582663 | coding | downstream | 703177 | 36668801 ~ 36679505 (+) |
| G601359 | NA | non-coding | upstream | 27661 | 35935732 ~ 35937338 (+) |
| G601358 | NA | non-coding | upstream | 29708 | 35935062 ~ 35935291 (+) |
| G601355 | NA | non-coding | upstream | 34160 | 35930516 ~ 35930839 (+) |
| G601354 | NA | non-coding | upstream | 38808 | 35925977 ~ 35926191 (+) |
| G601334 | NA | non-coding | upstream | 65101 | 35899214 ~ 35899898 (+) |
| G601368 | NA | non-coding | downstream | 8956 | 35974580 ~ 35974916 (+) |
| G601372 | NA | non-coding | downstream | 24245 | 35989869 ~ 35990400 (+) |
| G601377 | NA | non-coding | downstream | 30440 | 35996064 ~ 35996639 (+) |
| G601379 | NA | non-coding | downstream | 33232 | 35998856 ~ 35999606 (+) |
| G601389 | NA | non-coding | downstream | 74163 | 36039787 ~ 36040421 (+) |
| G600531 | NA | other | upstream | 993594 | 34971128 ~ 34971405 (+) |
| G600431 | NA | other | upstream | 1205341 | 34759347 ~ 34759658 (+) |
| G600013 | NA | other | upstream | 1998244 | 33966289 ~ 33966755 (+) |
| G599123 | NA | other | upstream | 2669471 | 33290526 ~ 33295528 (+) |
| G599004 | NA | other | upstream | 2728363 | 33235813 ~ 33236636 (+) |
| G602295 | gli1 | other | downstream | 1124000 | 37089624 ~ 37090756 (+) |
| G604207 | NA | other | downstream | 2533407 | 38499031 ~ 38499662 (+) |
| G604258 | NA | other | downstream | 2618850 | 38584474 ~ 38594822 (+) |
| G606400 | LOC105027254 | other | downstream | 4160910 | 40126534 ~ 40141972 (+) |
