G601379


Basic Information

Item Value
gene id G601379
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 35998856 ~ 35999606 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU685146
gttctattatcagttcaactggttctattatcaggttaACTGGTTCTATTGTCAGgttaactggttctattatcaggttaactggttctattatcaggttaactggttctattatcaggttaactggttctattatcaggttaactggttctattatcaggtgagctggttctattatcaggttaACTGGTTCTACTATCAGgctAACTGGTTCTTTTATCAGgttaactggttctattatcaggtg

Function

NR:

description
LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 4 regulatory subunit 4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU685146 True 247 lncRNA 0.36 3 35998856 35999606

Neighbor

gene id symbol gene type direction distance location
LOC110517647 pcdh9 coding upstream 945304 34531976 ~ 35053552 (+)
LOC118965286 NA coding upstream 1270046 34726401 ~ 34728810 (+)
rims4 rims4 coding upstream 2054288 33884249 ~ 33944568 (+)
tomm34 LOC106582656 coding upstream 2191377 33801778 ~ 33807479 (+)
LOC118965285 NA coding upstream 2199128 33774881 ~ 33799728 (+)
LOC118965354 NA coding downstream 6805 36006411 ~ 36024368 (+)
LOC110527683 LOC106582660 coding downstream 470710 36470316 ~ 36536037 (+)
LOC110527684 NA coding downstream 511388 36510994 ~ 36517194 (+)
LOC110527686 LOC106582662 coding downstream 574205 36573811 ~ 36582978 (+)
LOC110527688 LOC106582663 coding downstream 669195 36668801 ~ 36679505 (+)
G601377 NA non-coding upstream 2217 35996064 ~ 35996639 (+)
G601372 NA non-coding upstream 8456 35989869 ~ 35990400 (+)
G601368 NA non-coding upstream 23940 35974580 ~ 35974916 (+)
G601361 NA non-coding upstream 33232 35964999 ~ 35965624 (+)
G601359 NA non-coding upstream 61518 35935732 ~ 35937338 (+)
G601389 NA non-coding downstream 40181 36039787 ~ 36040421 (+)
G601431 NA non-coding downstream 84080 36083686 ~ 36084015 (+)
G601448 NA non-coding downstream 100819 36100425 ~ 36100844 (+)
G601451 NA non-coding downstream 102587 36102193 ~ 36103050 (+)
G601478 NA non-coding downstream 158485 36158091 ~ 36196201 (+)
G600531 NA other upstream 1027451 34971128 ~ 34971405 (+)
G600431 NA other upstream 1239198 34759347 ~ 34759658 (+)
G600013 NA other upstream 2032101 33966289 ~ 33966755 (+)
G599123 NA other upstream 2703328 33290526 ~ 33295528 (+)
G599004 NA other upstream 2762220 33235813 ~ 33236636 (+)
G602295 gli1 other downstream 1090018 37089624 ~ 37090756 (+)
G604207 NA other downstream 2499425 38499031 ~ 38499662 (+)
G604258 NA other downstream 2584868 38584474 ~ 38594822 (+)
G606400 LOC105027254 other downstream 4126928 40126534 ~ 40141972 (+)

Expression


Co-expression Network