G601389


Basic Information

Item Value
gene id G601389
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 36039787 ~ 36040421 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU685159
GATATAGACTGACCCTGTACTCTCCTGTTGAGATATAGACTGACCCTGTACTCTCCTGTTGAGATATAGACTGACCCTGTACCCTCCTATTGAGATATATAGACTgactctgtactctactgttgagATATAGACTGACCCTGTACCCTACTATTGAGATATATAGACTGACCCTGTACTCTCCTGTTGAGATATATAGACTGGccctgtactctactgttgaGATATAGACTGACCCTGTACCCTACTATTGAGATATATAGACTGACCCTGTACTCTCCTGTTGAGATATATAGACTGGccctgtactctactgttgaGATATAGACTGACCCTGTACCCTACTATTGAGATATATAGACTGACCCTGTACTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU685159 True 375 lncRNA 0.42 3 36039787 36040421

Neighbor

gene id symbol gene type direction distance location
LOC118965354 NA coding upstream 15419 36006411 ~ 36024368 (+)
LOC110517647 pcdh9 coding upstream 986235 34531976 ~ 35053552 (+)
LOC118965286 NA coding upstream 1310977 34726401 ~ 34728810 (+)
rims4 rims4 coding upstream 2095219 33884249 ~ 33944568 (+)
tomm34 LOC106582656 coding upstream 2232308 33801778 ~ 33807479 (+)
LOC110527683 LOC106582660 coding downstream 429895 36470316 ~ 36536037 (+)
LOC110527684 NA coding downstream 470573 36510994 ~ 36517194 (+)
LOC110527686 LOC106582662 coding downstream 533390 36573811 ~ 36582978 (+)
LOC110527688 LOC106582663 coding downstream 628380 36668801 ~ 36679505 (+)
LOC110527690 LOC106582665 coding downstream 828319 36868740 ~ 36896763 (+)
G601379 NA non-coding upstream 40181 35998856 ~ 35999606 (+)
G601377 NA non-coding upstream 43148 35996064 ~ 35996639 (+)
G601372 NA non-coding upstream 49387 35989869 ~ 35990400 (+)
G601368 NA non-coding upstream 64871 35974580 ~ 35974916 (+)
G601361 NA non-coding upstream 74163 35964999 ~ 35965624 (+)
G601431 NA non-coding downstream 43265 36083686 ~ 36084015 (+)
G601448 NA non-coding downstream 60004 36100425 ~ 36100844 (+)
G601451 NA non-coding downstream 61772 36102193 ~ 36103050 (+)
G601478 NA non-coding downstream 117670 36158091 ~ 36196201 (+)
G601496 NA non-coding downstream 153722 36194143 ~ 36194748 (+)
G600531 NA other upstream 1068382 34971128 ~ 34971405 (+)
G600431 NA other upstream 1280129 34759347 ~ 34759658 (+)
G600013 NA other upstream 2073032 33966289 ~ 33966755 (+)
G599123 NA other upstream 2744259 33290526 ~ 33295528 (+)
G599004 NA other upstream 2803151 33235813 ~ 33236636 (+)
G602295 gli1 other downstream 1049203 37089624 ~ 37090756 (+)
G604207 NA other downstream 2458610 38499031 ~ 38499662 (+)
G604258 NA other downstream 2544053 38584474 ~ 38594822 (+)
G606400 LOC105027254 other downstream 4086113 40126534 ~ 40141972 (+)

Expression


Co-expression Network