G601497


Basic Information

Item Value
gene id G601497
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 36127227 ~ 36195906 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU685280
CAAAGAGGTTCCCACGACGACGTGTCCTTAGCAACTCATCTTTCTTTGTTGACAGATTGATTATTTTCGGGACAGGAAGCAGCATcctgtcccctatatagtgcactacggcCCTATGGtactgttctaaagtagtgcactacgtagggaatagggtgccatagggctctggtctaaagtagtgcactatatatagggaatagggttctatagggctctggtctaaagtagtgcactatgtagggaatagggtgccatagggctctggtctaaagtagtgcactatgtagggaatagggtgccatagggctctggtctaaagtagtgcactatgtagggaatagggtgccatagggctctggtctaaagtagtgcactatatatagggaatagggttctatagggctctggtctaaagtagtgcactatatatagggaatagggttctatagggctctggtctaaagtagtgcactatatagggaatagggttctatagggctctggtctaaagtagtgcagtatatagggaatag
>TU685282
CAAAGAGGTTCCCACGACGACGTGTCCTTAGCAACTCATCTTTCTTTGTTGACAGATTGATTATTTTCGGGACAGGAAGCAGCATcctgtcccctatatagtgcactacggcCCTATGGtactgttctaaagtagtgcactacgtagggaatagggtgccatagggctctggtctaaagtagtgcactatatatagggaatagggttctatagggctctggtctaaagtagtgcactatgtagggaatagggtgccatagggctctggtctaaagtagtgcactatgtagggaatagggtgccatagggctctggtctaaagtagtgcactatgtagggaatagggtgccatagggctctggtctaaagtagtgcactatatatagggaatagggttctatagggctctggtctaaagtagtgcactatatatagggaatagggttctatagggctctggtctaaagtagtgcactatgtagggaatagggttctatagggctctggtctaaagtagtgcactatatagggaatagggttccatagggctctggtctaaagtagtgcactatatagggaatagggctccatttg
>TU685284
CAAAGAGGTTCCCACGACGACGTGTCCTTAGCAACTCATCTTTCTTTGTTGACAGATTGATTATTTTCGGGACAGGAAGCAGCATcctgtcccctatatagtgcactacggcCCTATGGtactgttctaaagtagtgcactacgtagggaatagggtgccatagggctctggtctaaagtagtgcactatgtagggaatagggtgccatagggctctggtctaaagtagtgcactatgtagggaatagggtgccatagggctctggtctaaagtagtgcactatgtagggaatagggctctggtctaaagtagtgcactatatagggaatagggttccatagggctctggtctaaagtagtgcactatatagggaatagggctccatttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU685280 False 536 lncRNA 0.45 2 36127227 36195906
TU685282 False 594 lncRNA 0.45 2 36195023 36195906
TU685284 True 390 lncRNA 0.47 3 36195023 36195906

Neighbor

gene id symbol gene type direction distance location
LOC118965353 NA coding downstream 514422 35612389 ~ 35612805 (-)
LOC118965352 NA coding downstream 927129 35099407 ~ 35200098 (-)
abraa LOC106582659 coding downstream 2168902 33951832 ~ 33958325 (-)
ywhaba LOC100136192 coding downstream 2291369 33817223 ~ 33835858 (-)
LOC110527679 LOC106565035 coding downstream 2352319 33770050 ~ 33774908 (-)
LOC110527685 LOC106582661 coding upstream 342232 36538138 ~ 36559214 (-)
LOC110528947 LOC106582664 coding upstream 542785 36738691 ~ 36858144 (-)
LOC110527694 LOC106582668 coding upstream 835368 37031274 ~ 37038809 (-)
gli1 LOC106566129 coding upstream 891842 37087748 ~ 37208952 (-)
LOC110527696 LOC106582672 coding upstream 1043659 37239565 ~ 37248455 (-)
G601424 NA non-coding downstream 55828 36068650 ~ 36071399 (-)
G601422 NA non-coding downstream 61107 36065880 ~ 36066120 (-)
G601421 NA non-coding downstream 61405 36065574 ~ 36065822 (-)
G601401 NA non-coding downstream 99636 36027016 ~ 36027591 (-)
G601376 NA non-coding downstream 133138 35993840 ~ 35994089 (-)
G601522 NA non-coding upstream 17644 36213550 ~ 36213788 (-)
G601527 NA non-coding upstream 20298 36216204 ~ 36216409 (-)
G601537 NA non-coding upstream 38049 36233955 ~ 36243335 (-)
G601560 NA non-coding upstream 107545 36303451 ~ 36309526 (-)
G601565 NA non-coding upstream 115498 36311404 ~ 36311675 (-)
G601245 NA other downstream 365957 35760699 ~ 35761270 (-)
G600881 NA other downstream 1071999 35001880 ~ 35055228 (-)
G600872 NA other downstream 1160441 34965447 ~ 34966786 (-)
G600721 NA other downstream 1512352 34614492 ~ 34614875 (-)
G604485 NA other upstream 2393249 38589155 ~ 38597519 (-)
G604484 NA other upstream 2393511 38584293 ~ 38639400 (-)
LOC110527723 LOC106582696 other upstream 2867099 39063005 ~ 39123578 (-)
G606135 NA other upstream 3642985 39838891 ~ 39841331 (-)
LOC110527741 LOC106582711 other upstream 4027649 40135298 ~ 40275270 (-)

Expression


Co-expression Network