G601517


Basic Information

Item Value
gene id G601517
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 36196852 ~ 36197070 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU685308
atacacacacgcacacatacacacacacacacacacacacacacacacacacacacatacacacacacatacacacatacacacatacacacacacatacacacatacacacacacatacacacatacacacacacacacacacacacacacacacatacacacacacatacacacatacacacatacacacacacatacacacatacacacacacata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU685308 True 219 lncRNA 0.42 1 36196852 36197070

Neighbor

gene id symbol gene type direction distance location
LOC118965354 NA coding upstream 172484 36006411 ~ 36024368 (+)
LOC110517647 pcdh9 coding upstream 1143300 34531976 ~ 35053552 (+)
LOC118965286 NA coding upstream 1468042 34726401 ~ 34728810 (+)
rims4 rims4 coding upstream 2252284 33884249 ~ 33944568 (+)
tomm34 LOC106582656 coding upstream 2389373 33801778 ~ 33807479 (+)
LOC110527683 LOC106582660 coding downstream 273246 36470316 ~ 36536037 (+)
LOC110527684 NA coding downstream 313924 36510994 ~ 36517194 (+)
LOC110527686 LOC106582662 coding downstream 376741 36573811 ~ 36582978 (+)
LOC110527688 LOC106582663 coding downstream 471731 36668801 ~ 36679505 (+)
LOC110527690 LOC106582665 coding downstream 671670 36868740 ~ 36896763 (+)
G601478 NA non-coding upstream 651 36158091 ~ 36196201 (+)
G601496 NA non-coding upstream 2104 36194143 ~ 36194748 (+)
G601451 NA non-coding upstream 93802 36102193 ~ 36103050 (+)
G601448 NA non-coding upstream 96008 36100425 ~ 36100844 (+)
G601431 NA non-coding upstream 112837 36083686 ~ 36084015 (+)
G601520 NA non-coding downstream 6094 36203164 ~ 36203433 (+)
G601526 NA non-coding downstream 19037 36216107 ~ 36216444 (+)
G601530 NA non-coding downstream 23971 36221041 ~ 36222541 (+)
G601540 NA non-coding downstream 57268 36254338 ~ 36297538 (+)
G601563 NA non-coding downstream 113540 36310610 ~ 36311696 (+)
G600531 NA other upstream 1225447 34971128 ~ 34971405 (+)
G600431 NA other upstream 1437194 34759347 ~ 34759658 (+)
G600013 NA other upstream 2230097 33966289 ~ 33966755 (+)
G599123 NA other upstream 2901324 33290526 ~ 33295528 (+)
G599004 NA other upstream 2960216 33235813 ~ 33236636 (+)
G602295 gli1 other downstream 892554 37089624 ~ 37090756 (+)
G604207 NA other downstream 2301961 38499031 ~ 38499662 (+)
G604258 NA other downstream 2387404 38584474 ~ 38594822 (+)
G606400 LOC105027254 other downstream 3929464 40126534 ~ 40141972 (+)

Expression


Co-expression Network