G601537


Basic Information

Item Value
gene id G601537
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 36233955 ~ 36243335 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU685346
ttttttccatgccttgctatggggtccttgaatgagctatcggacagaaacgttggggtccgtctctatgggccgagccggtttcaatgcacctagtcttgcgtctctgagacttttctaaatgtcatcattttcgtaatggtcaaaatgaattgaagtcattgcaaatgtacgaggctgtttctcggtccgagaaccttctagagccacgtaactcaccacgcactatcgacctgaggtctagaacaggtttctaacattTCAGAACTCTACGTCGGacagttcttttttagctcgaacaaagctaactattgcaggcactgtctgtctctacgcaccccaatacgtccctccttccaagttgtgtgtctgtgtgatttagttttcctttgaaattttatgggaaaaatgactgatttacagttcatgggggttgcctaatcacacatatgaagttttggagagatgtgacttttttaacccttcgaaacagcccctgtgacacaaattatggcacttccggttggtacaggaagctataagtaaacacatgtcttgactgaggtagcctcttacagaatcctgagttttaagtctttacgttaagaactgactgatttacacagggttgaatgcactatgtctatcaaactgcaggcattgtatggatatacacttttagggtgattttaaccacttccggttggtccaggaagcttagaatcgacacaggtagacctcatagtggcctgatggactgtcatcgatgacaggttcatacggcattcataacccacataggcttcaggttgaatttcggggtgcaggcaatgtattcctatggggagagaagtcattgtcatctgtgagatcaaaaaaccctgttttactgttaagggttaatgccacacggtcaaggttaggcttgcacggatcgggaggaccttaggaacgtacctgaggtcgaattgtgcttctcaccctaacggttctctcactgtcacccaaaagcaaatgacgttgtggggcaggcttcattttgggcctacttttctaatggtcgctgcgcttagaccgagcgagctacggtcaagcgggatatctcgatgaactctgcacggcctagggattatggtaatgtcattgcctgctctctgtgtctttaagcaccgcactttttcactccatccttgctgtgtgtgtgtgagagagcttttctttgacatctgttgggagaaatgactgatttacagttcaggagggttacctagtcacacatatgaagttttggagagatgtgacttttttaaccctacaaaacagacagtgtgacccaattaaaggcacttccggttggcacaggaagctataagtaaacacatgtcttgactgaggtagcctcttacagaatcctgagttttaagtctttaagttaagaattgactgatctacacagggttgaatgcagtgattttcataatgacaggttatgtgtttcaaaacacttttagggtgaatttaaccacttccggttggtccaggaagcttagaatcgacacaggtagacctcatagtggcctgatggactgtcatcgatgacaggttaatacagcattcataacccacataggcttccggttgaatttaggggtgcaggcaatgtattcctatggggagagaagtcaatgcaaactgtttgaagtaaacacctacttttaactgttaagggttaatgccacacggtcgaggtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU685346 True 1751 lncRNA 0.44 2 36233955 36243335

Neighbor

gene id symbol gene type direction distance location
LOC118965353 NA coding downstream 621150 35612389 ~ 35612805 (-)
LOC118965352 NA coding downstream 1033857 35099407 ~ 35200098 (-)
abraa LOC106582659 coding downstream 2275630 33951832 ~ 33958325 (-)
ywhaba LOC100136192 coding downstream 2398097 33817223 ~ 33835858 (-)
LOC110527679 LOC106565035 coding downstream 2459047 33770050 ~ 33774908 (-)
LOC110527685 LOC106582661 coding upstream 294803 36538138 ~ 36559214 (-)
LOC110528947 LOC106582664 coding upstream 495356 36738691 ~ 36858144 (-)
LOC110527694 LOC106582668 coding upstream 787939 37031274 ~ 37038809 (-)
gli1 LOC106566129 coding upstream 844413 37087748 ~ 37208952 (-)
LOC110527696 LOC106582672 coding upstream 996230 37239565 ~ 37248455 (-)
G601527 NA non-coding downstream 17546 36216204 ~ 36216409 (-)
G601522 NA non-coding downstream 20167 36213550 ~ 36213788 (-)
G601497 NA non-coding downstream 38049 36127227 ~ 36195906 (-)
G601560 NA non-coding upstream 60116 36303451 ~ 36309526 (-)
G601565 NA non-coding upstream 68069 36311404 ~ 36311675 (-)
G601566 NA non-coding upstream 68677 36312012 ~ 36312465 (-)
G601760 NA non-coding upstream 259062 36502397 ~ 36502625 (-)
G601765 NA non-coding upstream 267862 36511197 ~ 36511770 (-)
G601245 NA other downstream 472685 35760699 ~ 35761270 (-)
G600881 NA other downstream 1178727 35001880 ~ 35055228 (-)
G600872 NA other downstream 1267169 34965447 ~ 34966786 (-)
G600721 NA other downstream 1619080 34614492 ~ 34614875 (-)
G604485 NA other upstream 2345820 38589155 ~ 38597519 (-)
G604484 NA other upstream 2346082 38584293 ~ 38639400 (-)
LOC110527723 LOC106582696 other upstream 2819670 39063005 ~ 39123578 (-)
G606135 NA other upstream 3595556 39838891 ~ 39841331 (-)
LOC110527741 LOC106582711 other upstream 3980220 40135298 ~ 40275270 (-)

Expression


Co-expression Network