G601816



Basic Information


Item Value
gene id G601816
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 36606449 ~ 36606783 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU685654
GGACAAAGGTTTCCTTGTGGACGACTGTGTGCCCTGCAAGGTCTACACACCGACTTTTCTCTTAAAGAGATCACAGATGCCAGCAGCAGAAGTCAGGGAGATGCATTCCACCACTCGGCTGAGGGTCCATGTGGAGCGGCTGATTAGCAGAACGAAAGATCATAAGCTGTTTGACACTCatacctctctccttcactgGGATCAACCAGCTCTACACCGTTGCCTGCCTCCTCATCAACTACCAGAATGGGCCGCTGGTCAAAGCTTGGGCAAAGGACTAGTGATGATGTCAATTTCAATACGATTAGACTGGTAACTGGATTGGCCTGTTTTTT

Function


NR:

description
PREDICTED: uncharacterized protein LOC109061412

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU685654 True 335 lncRNA 0.49 1 36606449 36606783

Neighbor


gene id symbol gene type direction distance location
LOC110527685 LOC106582661 coding downstream 47235 36538138 ~ 36559214 (-)
LOC118965353 NA coding downstream 993644 35612389 ~ 35612805 (-)
LOC118965352 NA coding downstream 1406351 35099407 ~ 35200098 (-)
abraa LOC106582659 coding downstream 2648124 33951832 ~ 33958325 (-)
ywhaba LOC100136192 coding downstream 2770591 33817223 ~ 33835858 (-)
LOC110528947 LOC106582664 coding upstream 131908 36738691 ~ 36858144 (-)
LOC110527694 LOC106582668 coding upstream 424491 37031274 ~ 37038809 (-)
gli1 LOC106566129 coding upstream 480965 37087748 ~ 37208952 (-)
LOC110527696 LOC106582672 coding upstream 632782 37239565 ~ 37248455 (-)
LOC110527700 NA coding upstream 1103396 37710179 ~ 37714146 (-)
G601783 NA non-coding downstream 21673 36539449 ~ 36584776 (-)
G601782 NA non-coding downstream 70404 36535771 ~ 36536045 (-)
G601765 NA non-coding downstream 94679 36511197 ~ 36511770 (-)
G601760 NA non-coding downstream 103824 36502397 ~ 36502625 (-)
G601566 NA non-coding downstream 293984 36312012 ~ 36312465 (-)
G601818 NA non-coding upstream 593 36607376 ~ 36607591 (-)
G601825 NA non-coding upstream 5990 36612773 ~ 36613020 (-)
G601839 NA non-coding upstream 13332 36620115 ~ 36620440 (-)
G602018 NA non-coding upstream 63845 36670628 ~ 36670870 (-)
G602055 NA non-coding upstream 124814 36731597 ~ 36735768 (-)
G601245 NA other downstream 845179 35760699 ~ 35761270 (-)
G600881 NA other downstream 1551221 35001880 ~ 35055228 (-)
G600872 NA other downstream 1639663 34965447 ~ 34966786 (-)
G600721 NA other downstream 1991574 34614492 ~ 34614875 (-)
LOC110527679 LOC106565035 other downstream 2831835 33770050 ~ 33774908 (-)
G604485 NA other upstream 1982372 38589155 ~ 38597519 (-)
G604484 NA other upstream 1982634 38584293 ~ 38639400 (-)
LOC110527723 LOC106582696 other upstream 2456222 39063005 ~ 39123578 (-)
G606135 NA other upstream 3232108 39838891 ~ 39841331 (-)
LOC110527741 LOC106582711 other upstream 3616772 40135298 ~ 40275270 (-)

Expression



Co-expression Network