XLOC_025344 (CR936416.1)



Basic Information


Item Value
gene id XLOC_025344
gene name CR936416.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 25055976 ~ 25060120 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00050018
CGGGCTCCAGCATCATCTGATGTTGGAGCCACTAACGTTAGATATGCGAAACGATGCCCACTACGTTGTGTTACTTGGCGTGCAAAATAAGACTTGTCTTCGCTATCTGTAGGGACAGACAGCTTCCTCTGAGAAACGCAGGGGTCAAGTGCCTAATTTAAGTCCAGTAGCGATAAGAGTCTTCTGCATGTGCACAAGTTCTCTCCACCTCACTGATGGTTTTTGGGGTGTTTGCGGACAGAATGAGGGGTCCACCGTGGTCTCGGATCACCACGTCATCCTCAATTCGCACCCCAAGACCCCTGAATCGCTCAGGACAGGACCTGTTGTCCTCGCTGATGTACAGTCCTGGATTATGGGAAGAAGAAATAAGAGTTTAG

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097379

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00050018 True 380 lncRNA 0.50 2 25055976 25060120

Neighbor


gene id symbol gene type direction distance location
XLOC_025343 cbx7a coding upstream 61359 24986145 ~ 24994617 (+)
XLOC_025342 NA coding upstream 119721 24930580 ~ 24936255 (+)
XLOC_025341 mrtfaa coding upstream 290849 24708685 ~ 24765127 (+)
XLOC_025340 slc25a17 coding upstream 363613 24681855 ~ 24692363 (+)
XLOC_025339 zmp:0000000912 coding upstream 395648 24655643 ~ 24660328 (+)
XLOC_025345 st13 coding downstream 27485 25087605 ~ 25100726 (+)
XLOC_025346 napsa coding downstream 61036 25121156 ~ 25133244 (+)
XLOC_025347 si:ch211-256m1.8 coding downstream 93958 25154078 ~ 25165189 (+)
XLOC_025348 TST coding downstream 106685 25166805 ~ 25169831 (+)
XLOC_025349 il2rb coding downstream 131246 25191366 ~ 25209006 (+)
XLOC_025429 BX649540.1 misc downstream 5188619 30248739 ~ 30249036 (+)
XLOC_025327 NA non-coding upstream 603963 24438597 ~ 24452013 (+)
XLOC_025323 NA non-coding upstream 838465 24217188 ~ 24217511 (+)
XLOC_025319 CR790362.1 non-coding upstream 871550 24161869 ~ 24184426 (+)
XLOC_025317 NA non-coding upstream 922491 24121201 ~ 24133485 (+)
XLOC_025351 NA non-coding downstream 248590 25308710 ~ 25308964 (+)
XLOC_025353 NA non-coding downstream 512658 25572778 ~ 25573533 (+)
XLOC_025354 NA non-coding downstream 543548 25603668 ~ 25624618 (+)
XLOC_025355 NA non-coding downstream 585111 25645231 ~ 25648375 (+)
XLOC_025356 NA non-coding downstream 640471 25700591 ~ 25720214 (+)

Expression



Co-expression Network