G602293


Basic Information

Item Value
gene id G602293
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 37082947 ~ 37084573 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU686153
TAAAATTTAGAAAATTGTACACAAAATATATCATGTGTAAATAGAAAACGCTACGATCATAACCTTTGTTGCTTAACAGAATATTATTTCGCCAGCAAAAAAGTCTGATTGAACGGTGACAGGCAGGTatcaaaacacacaacacagagaagAAAGGCAAATATCCATGATAAAGGTCATTCTTATAGAAACAAAAAGAGGACATTTCATACATTCTAAGTAACGGCACTATCAAACCATTCACACCTTCATAGCCGTGACTATGAGTATTGTgcatctttttttttctttctccttgAATATTGTTAGTTCAAATCGTCTTTGGTTGGTTGATAGGTTGTACACAGTTTTCCTGACTAGATTAGTTTTTCCTGACTACTAACTCTAATCCTGCATTAAGAACAACAGTAAAGTACTAGAAATAATAAAGCATGATTGAAAAGGCACCAATActgagatattactgcactgttcgagctaggaacacaagcatttcgctacacctgcaataacacctgctaaatacgtgtatgtgagcaaatacattttgatttgaaatacagCCTCATAAGATCTCCTGTAGTTGTGTGTAAACGTGATCTAGAATAACCATCCAAACAGATAGATACTACTGTAAGATACATTCCATCATCCTCCAAGCTGATGCTACATGAAATCAAAGCCATGTTGGCCAATGTGTTGGCCTCTAGACAGTCTCTATGTCACAAAGTCAAGGAGAGAGACTCGTCCACGTCCACGCAATGCTGCAGTCAGTGCAATGCTACAGTATGATGTCATGTGATGTCAGCTCTACTGGTTGGCTGCGGACAGGCTGTCAGAGGTAGAGGCTCTAGAATCTATAGAAAGGacctccccattcaagtcaatgatgccaTAATAGGTGGactgattctatttctatggtcagAGAGCCTCACCGCCATATACTGTACACGCTAAAGTACCTCAACGCCGTACCCCCAATCCATTATGAATCCTGTTTAAGGTTTTCCGGGGTGAGGGAAGGTATCTTTAAGACCCTGTCAAATATGTGACCAAGTTGGGTCGTATGATACTGTACCAGATGCAATATTTGATTTCATTCAGAAGTTccacctttctttctctctcttttattctctGTACCTCTCGAGCATCATGGATAAGTTTAGACAAAGGCACTTTTTGATATTCTTATCCTATAACCCCTATACTTGTAAAATAGTGAGCTGCTTTAAGAACACTTAGGTATAATAAACATGTAACAGGTCTAAAAACATGTACTTTACCGTACAACAGATTCAGAGTATGGAGGCAGATTAATGCCAAACAGGCCTCTGAGTGAATACTGATATGATATGTCATCATTACGCTATGTCTGTCAtcattatgtacagttgaagtcagaagtttacatacaccttagccaaatacatttcaacccagtttttcacaattcctgacatttaatcctagtaaaaattccatgtcttaggtcagttaggatcaccagtttattttaagaatgtgaaatgtccgaataatagtagagagaatgatttatttcagcttttatttattttgtcacattcccagtgggtcagaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU686153 True 1607 lncRNA 0.38 2 37082947 37084573

Neighbor

gene id symbol gene type direction distance location
arhgap9 LOC106582667 coding upstream 68893 36955176 ~ 37014054 (+)
LOC110527691 LOC106582666 coding upstream 169935 36907551 ~ 36913012 (+)
LOC110527690 LOC106582665 coding upstream 186184 36868740 ~ 36896763 (+)
LOC110527688 LOC106582663 coding upstream 403442 36668801 ~ 36679505 (+)
LOC110527686 LOC106582662 coding upstream 499969 36573811 ~ 36582978 (+)
LOC110527697 r3hdm2 coding downstream 179820 37264393 ~ 37342630 (+)
LOC110527699 LOC106582673 coding downstream 384437 37469010 ~ 37575510 (+)
LOC118965405 NA coding downstream 450491 37535064 ~ 37535117 (+)
LOC110527703 LOC106582676 coding downstream 878315 37950666 ~ 38002305 (+)
LOC110527704 LOC106582678 coding downstream 951423 38035996 ~ 38040937 (+)
G602137 NA non-coding upstream 221615 36861091 ~ 36861332 (+)
G602133 NA non-coding upstream 224326 36858394 ~ 36858621 (+)
G601681 NA non-coding upstream 497868 36584866 ~ 36585079 (+)
G601656 pcbp2 non-coding upstream 526569 36545644 ~ 36556378 (+)
G601613 NA non-coding upstream 538208 36541282 ~ 36544739 (+)
G602294 NA non-coding downstream 713 37085286 ~ 37085759 (+)
G602296 NA non-coding downstream 6261 37090834 ~ 37091070 (+)
G602297 gli1 non-coding downstream 6741 37091314 ~ 37091733 (+)
G602303 NA non-coding downstream 13570 37098143 ~ 37098371 (+)
G602306 NA non-coding downstream 19106 37103679 ~ 37104137 (+)
G600531 NA other upstream 2111542 34971128 ~ 34971405 (+)
G600431 NA other upstream 2323289 34759347 ~ 34759658 (+)
G600013 NA other upstream 3116192 33966289 ~ 33966755 (+)
G599123 NA other upstream 3787419 33290526 ~ 33295528 (+)
G602295 gli1 other downstream 5051 37089624 ~ 37090756 (+)
G604207 NA other downstream 1414458 38499031 ~ 38499662 (+)
G604258 NA other downstream 1499901 38584474 ~ 38594822 (+)
G606400 LOC105027254 other downstream 3041961 40126534 ~ 40141972 (+)
G606452 LOC106582711 other downstream 3121996 40206569 ~ 40206897 (+)

Expression


Co-expression Network