G602294


Basic Information

Item Value
gene id G602294
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 37085286 ~ 37085759 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU686154
ggattgatgtgcacttttcgcaccaaagtggtcccaaggtgtttatacttgcatactattgtttgtacagatgaatgtggcaccttcaggcgtttggaaattgctcccaagaatgaaccagacttgtggaggtctacaattttttttctgaggtcttggatgatttctttagattttcccatgacgtcaagcaaagaggcacagagtttgaaggtaggtcctgaaatacatccacaggtacacctcacctccaattgactgaaattatgtaaattagcctatcagaagcttctaaagccatgacatcattttctgggattttccaagctgtttaaaggcacagtcaacttagtgtatgtatgtaaacttctgacccactggaattgtgatacagtgaattataagtgaaataatctgtctgtaaacaattgttgtaaaaaattacttgtgttatgcattaagtagatgtcctaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU686154 True 474 lncRNA 0.38 1 37085286 37085759

Neighbor

gene id symbol gene type direction distance location
arhgap9 LOC106582667 coding upstream 71232 36955176 ~ 37014054 (+)
LOC110527691 LOC106582666 coding upstream 172274 36907551 ~ 36913012 (+)
LOC110527690 LOC106582665 coding upstream 188523 36868740 ~ 36896763 (+)
LOC110527688 LOC106582663 coding upstream 405781 36668801 ~ 36679505 (+)
LOC110527686 LOC106582662 coding upstream 502308 36573811 ~ 36582978 (+)
LOC110527697 r3hdm2 coding downstream 178634 37264393 ~ 37342630 (+)
LOC110527699 LOC106582673 coding downstream 383251 37469010 ~ 37575510 (+)
LOC118965405 NA coding downstream 449305 37535064 ~ 37535117 (+)
LOC110527703 LOC106582676 coding downstream 877129 37950666 ~ 38002305 (+)
LOC110527704 LOC106582678 coding downstream 950237 38035996 ~ 38040937 (+)
G602293 NA non-coding upstream 713 37082947 ~ 37084573 (+)
G602137 NA non-coding upstream 223954 36861091 ~ 36861332 (+)
G602133 NA non-coding upstream 226665 36858394 ~ 36858621 (+)
G601681 NA non-coding upstream 500207 36584866 ~ 36585079 (+)
G601656 pcbp2 non-coding upstream 528908 36545644 ~ 36556378 (+)
G602296 NA non-coding downstream 5075 37090834 ~ 37091070 (+)
G602297 gli1 non-coding downstream 5555 37091314 ~ 37091733 (+)
G602303 NA non-coding downstream 12384 37098143 ~ 37098371 (+)
G602306 NA non-coding downstream 17920 37103679 ~ 37104137 (+)
G602312 NA non-coding downstream 26846 37112605 ~ 37112810 (+)
G600531 NA other upstream 2113881 34971128 ~ 34971405 (+)
G600431 NA other upstream 2325628 34759347 ~ 34759658 (+)
G600013 NA other upstream 3118531 33966289 ~ 33966755 (+)
G599123 NA other upstream 3789758 33290526 ~ 33295528 (+)
G602295 gli1 other downstream 3865 37089624 ~ 37090756 (+)
G604207 NA other downstream 1413272 38499031 ~ 38499662 (+)
G604258 NA other downstream 1498715 38584474 ~ 38594822 (+)
G606400 LOC105027254 other downstream 3040775 40126534 ~ 40141972 (+)
G606452 LOC106582711 other downstream 3120810 40206569 ~ 40206897 (+)

Expression


Co-expression Network