Gene
RNA
| Item | Value |
|---|---|
| gene id | G602306 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 37103679 ~ 37104137 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| zinc finger protein GLI1-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU686166 | True | 459 | lncRNA | 0.53 | 1 | 37103679 | 37104137 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| arhgap9 | LOC106582667 | coding | upstream | 89625 | 36955176 ~ 37014054 (+) |
| LOC110527691 | LOC106582666 | coding | upstream | 190667 | 36907551 ~ 36913012 (+) |
| LOC110527690 | LOC106582665 | coding | upstream | 206916 | 36868740 ~ 36896763 (+) |
| LOC110527688 | LOC106582663 | coding | upstream | 424174 | 36668801 ~ 36679505 (+) |
| LOC110527686 | LOC106582662 | coding | upstream | 520701 | 36573811 ~ 36582978 (+) |
| LOC110527697 | r3hdm2 | coding | downstream | 160256 | 37264393 ~ 37342630 (+) |
| LOC110527699 | LOC106582673 | coding | downstream | 364873 | 37469010 ~ 37575510 (+) |
| LOC118965405 | NA | coding | downstream | 430927 | 37535064 ~ 37535117 (+) |
| LOC110527703 | LOC106582676 | coding | downstream | 858751 | 37950666 ~ 38002305 (+) |
| LOC110527704 | LOC106582678 | coding | downstream | 931859 | 38035996 ~ 38040937 (+) |
| G602303 | NA | non-coding | upstream | 5308 | 37098143 ~ 37098371 (+) |
| G602297 | gli1 | non-coding | upstream | 11946 | 37091314 ~ 37091733 (+) |
| G602296 | NA | non-coding | upstream | 12609 | 37090834 ~ 37091070 (+) |
| G602294 | NA | non-coding | upstream | 17920 | 37085286 ~ 37085759 (+) |
| G602293 | NA | non-coding | upstream | 19106 | 37082947 ~ 37084573 (+) |
| G602312 | NA | non-coding | downstream | 8468 | 37112605 ~ 37112810 (+) |
| G602313 | NA | non-coding | downstream | 9309 | 37113446 ~ 37113748 (+) |
| G602324 | NA | non-coding | downstream | 28418 | 37132555 ~ 37132778 (+) |
| G602329 | NA | non-coding | downstream | 32740 | 37136877 ~ 37137121 (+) |
| G602334 | NA | non-coding | downstream | 37413 | 37141550 ~ 37141763 (+) |
| G602295 | gli1 | other | upstream | 12923 | 37089624 ~ 37090756 (+) |
| G600531 | NA | other | upstream | 2132274 | 34971128 ~ 34971405 (+) |
| G600431 | NA | other | upstream | 2344021 | 34759347 ~ 34759658 (+) |
| G600013 | NA | other | upstream | 3136924 | 33966289 ~ 33966755 (+) |
| G604207 | NA | other | downstream | 1394894 | 38499031 ~ 38499662 (+) |
| G604258 | NA | other | downstream | 1480337 | 38584474 ~ 38594822 (+) |
| G606400 | LOC105027254 | other | downstream | 3022397 | 40126534 ~ 40141972 (+) |
| G606452 | LOC106582711 | other | downstream | 3102432 | 40206569 ~ 40206897 (+) |
| G606464 | LOC106582711 | other | downstream | 3119038 | 40223027 ~ 40224171 (+) |
