G602329


Basic Information

Item Value
gene id G602329
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 37136877 ~ 37137121 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU686189
atgatataacaagtgacatcaataagggatcatagctttcacctggattcacctggtaagtctgtcatggaaagagaaggtgttcttaatgttttgtatactcagtgtatgtaagtAAAAGCCCTGGGAGgcgagttgatacaattccaagtctggaaggttaaaaccaccctcagtcTTAGGAAGATGTCAGACTTTGCTTTTCATTCTATGAGTTTTATTTGCCCATATGAAGTATGTTatga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU686189 True 245 lncRNA 0.38 1 37136877 37137121

Neighbor

gene id symbol gene type direction distance location
arhgap9 LOC106582667 coding upstream 122823 36955176 ~ 37014054 (+)
LOC110527691 LOC106582666 coding upstream 223865 36907551 ~ 36913012 (+)
LOC110527690 LOC106582665 coding upstream 240114 36868740 ~ 36896763 (+)
LOC110527688 LOC106582663 coding upstream 457372 36668801 ~ 36679505 (+)
LOC110527686 LOC106582662 coding upstream 553899 36573811 ~ 36582978 (+)
LOC110527697 r3hdm2 coding downstream 127272 37264393 ~ 37342630 (+)
LOC110527699 LOC106582673 coding downstream 331889 37469010 ~ 37575510 (+)
LOC118965405 NA coding downstream 397943 37535064 ~ 37535117 (+)
LOC110527703 LOC106582676 coding downstream 825767 37950666 ~ 38002305 (+)
LOC110527704 LOC106582678 coding downstream 898875 38035996 ~ 38040937 (+)
G602324 NA non-coding upstream 4099 37132555 ~ 37132778 (+)
G602313 NA non-coding upstream 23129 37113446 ~ 37113748 (+)
G602312 NA non-coding upstream 24067 37112605 ~ 37112810 (+)
G602306 NA non-coding upstream 32740 37103679 ~ 37104137 (+)
G602303 NA non-coding upstream 38506 37098143 ~ 37098371 (+)
G602334 NA non-coding downstream 4429 37141550 ~ 37141763 (+)
G602335 NA non-coding downstream 5152 37142273 ~ 37142473 (+)
G602338 NA non-coding downstream 8946 37146067 ~ 37146917 (+)
G602349 NA non-coding downstream 28799 37165920 ~ 37166209 (+)
G602352 NA non-coding downstream 40837 37177958 ~ 37178316 (+)
G602295 gli1 other upstream 46121 37089624 ~ 37090756 (+)
G600531 NA other upstream 2165472 34971128 ~ 34971405 (+)
G600431 NA other upstream 2377219 34759347 ~ 34759658 (+)
G600013 NA other upstream 3170122 33966289 ~ 33966755 (+)
G604207 NA other downstream 1361910 38499031 ~ 38499662 (+)
G604258 NA other downstream 1447353 38584474 ~ 38594822 (+)
G606400 LOC105027254 other downstream 2989413 40126534 ~ 40141972 (+)
G606452 LOC106582711 other downstream 3069448 40206569 ~ 40206897 (+)
G606464 LOC106582711 other downstream 3086054 40223027 ~ 40224171 (+)

Expression


Co-expression Network