G602334


Basic Information

Item Value
gene id G602334
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 37141550 ~ 37141763 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU686194
ggctagactgtaaactctccttccagactcatattaagcatctccaatccaaaatgaaatctagaatcggcttcctattttgcaacaaagcctccttcactctgCCAAATACACcttcataaaactgactatcctaccgatccttgacttcggggatgtcatttacaaaatagcctccaacactctactcagcaaattggaggcagtctatcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU686194 True 214 lncRNA 0.42 1 37141550 37141763

Neighbor

gene id symbol gene type direction distance location
arhgap9 LOC106582667 coding upstream 127496 36955176 ~ 37014054 (+)
LOC110527691 LOC106582666 coding upstream 228538 36907551 ~ 36913012 (+)
LOC110527690 LOC106582665 coding upstream 244787 36868740 ~ 36896763 (+)
LOC110527688 LOC106582663 coding upstream 462045 36668801 ~ 36679505 (+)
LOC110527686 LOC106582662 coding upstream 558572 36573811 ~ 36582978 (+)
LOC110527697 r3hdm2 coding downstream 122630 37264393 ~ 37342630 (+)
LOC110527699 LOC106582673 coding downstream 327247 37469010 ~ 37575510 (+)
LOC118965405 NA coding downstream 393301 37535064 ~ 37535117 (+)
LOC110527703 LOC106582676 coding downstream 821125 37950666 ~ 38002305 (+)
LOC110527704 LOC106582678 coding downstream 894233 38035996 ~ 38040937 (+)
G602329 NA non-coding upstream 4429 37136877 ~ 37137121 (+)
G602324 NA non-coding upstream 8772 37132555 ~ 37132778 (+)
G602313 NA non-coding upstream 27802 37113446 ~ 37113748 (+)
G602312 NA non-coding upstream 28740 37112605 ~ 37112810 (+)
G602306 NA non-coding upstream 37413 37103679 ~ 37104137 (+)
G602335 NA non-coding downstream 510 37142273 ~ 37142473 (+)
G602338 NA non-coding downstream 4304 37146067 ~ 37146917 (+)
G602349 NA non-coding downstream 24157 37165920 ~ 37166209 (+)
G602352 NA non-coding downstream 36195 37177958 ~ 37178316 (+)
G602357 NA non-coding downstream 43029 37184792 ~ 37185071 (+)
G602295 gli1 other upstream 50794 37089624 ~ 37090756 (+)
G600531 NA other upstream 2170145 34971128 ~ 34971405 (+)
G600431 NA other upstream 2381892 34759347 ~ 34759658 (+)
G600013 NA other upstream 3174795 33966289 ~ 33966755 (+)
G604207 NA other downstream 1357268 38499031 ~ 38499662 (+)
G604258 NA other downstream 1442711 38584474 ~ 38594822 (+)
G606400 LOC105027254 other downstream 2984771 40126534 ~ 40141972 (+)
G606452 LOC106582711 other downstream 3064806 40206569 ~ 40206897 (+)
G606464 LOC106582711 other downstream 3081412 40223027 ~ 40224171 (+)

Expression


Co-expression Network