G602338


Basic Information

Item Value
gene id G602338
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 37146067 ~ 37146917 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU686198
gtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttcagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttcaattttggtttcatctgaacagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacaacactttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatacggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacaatgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgaatttgttaaaaaagttagaaatatccaataattgtc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU686198 True 851 lncRNA 0.42 1 37146067 37146917

Neighbor

gene id symbol gene type direction distance location
arhgap9 LOC106582667 coding upstream 132013 36955176 ~ 37014054 (+)
LOC110527691 LOC106582666 coding upstream 233055 36907551 ~ 36913012 (+)
LOC110527690 LOC106582665 coding upstream 249304 36868740 ~ 36896763 (+)
LOC110527688 LOC106582663 coding upstream 466562 36668801 ~ 36679505 (+)
LOC110527686 LOC106582662 coding upstream 563089 36573811 ~ 36582978 (+)
LOC110527697 r3hdm2 coding downstream 117476 37264393 ~ 37342630 (+)
LOC110527699 LOC106582673 coding downstream 322093 37469010 ~ 37575510 (+)
LOC118965405 NA coding downstream 388147 37535064 ~ 37535117 (+)
LOC110527703 LOC106582676 coding downstream 815971 37950666 ~ 38002305 (+)
LOC110527704 LOC106582678 coding downstream 889079 38035996 ~ 38040937 (+)
G602335 NA non-coding upstream 3594 37142273 ~ 37142473 (+)
G602334 NA non-coding upstream 4304 37141550 ~ 37141763 (+)
G602329 NA non-coding upstream 8946 37136877 ~ 37137121 (+)
G602324 NA non-coding upstream 13289 37132555 ~ 37132778 (+)
G602313 NA non-coding upstream 32319 37113446 ~ 37113748 (+)
G602349 NA non-coding downstream 19003 37165920 ~ 37166209 (+)
G602352 NA non-coding downstream 31041 37177958 ~ 37178316 (+)
G602357 NA non-coding downstream 37875 37184792 ~ 37185071 (+)
G602383 NA non-coding downstream 59475 37206392 ~ 37206613 (+)
G602386 NA non-coding downstream 61484 37208401 ~ 37208921 (+)
G602295 gli1 other upstream 55311 37089624 ~ 37090756 (+)
G600531 NA other upstream 2174662 34971128 ~ 34971405 (+)
G600431 NA other upstream 2386409 34759347 ~ 34759658 (+)
G600013 NA other upstream 3179312 33966289 ~ 33966755 (+)
G604207 NA other downstream 1352114 38499031 ~ 38499662 (+)
G604258 NA other downstream 1437557 38584474 ~ 38594822 (+)
G606400 LOC105027254 other downstream 2979617 40126534 ~ 40141972 (+)
G606452 LOC106582711 other downstream 3059652 40206569 ~ 40206897 (+)
G606464 LOC106582711 other downstream 3076258 40223027 ~ 40224171 (+)

Expression


Co-expression Network