G602386


Basic Information

Item Value
gene id G602386
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 37208401 ~ 37208921 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU686260
TAAATATATAGTCAACATGACATTACATGACTGGGAAATCAAAATAAGACTTgcatagaaacaaacaacaaagACACCTTCAGCACCCCTTTCCTTCCAAAACCACTCATATCGACGAATTTTGGTAACGTAGAATGGAGTATATGGAATAGATTAAGCATGGCAATACCTTCTATGAAAAGTTGAAGACGTCTGCATCAGTTTGTTGACTTGATCCCAAGACTTTGGAAGTTTTGGAAGTTTGGGGGTGAGATCTCTTGCGTCCCGCTGGGGGTTCAAGAATTTCCAATaaagctccctctctctctgcgttCTGGCAGACATACAGATGGAGCTGCAGGAATGATCCTTTAGTTCTTTCTTCTATTCCTCCCGTGTTCAATTCACGTCTTTGTCCAATTTGTAGGAGCTTCTTTCCATCGTTTTCTTTATAGGTAATTCTTGAAATCAGTGTGCAGGACAGCATTGAACAAACCCCATATTCGGTAACCAAACTCCCGCAAACCCGAAGTTGGTTGCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU686260 True 521 lncRNA 0.41 1 37208401 37208921

Neighbor

gene id symbol gene type direction distance location
arhgap9 LOC106582667 coding upstream 194347 36955176 ~ 37014054 (+)
LOC110527691 LOC106582666 coding upstream 295389 36907551 ~ 36913012 (+)
LOC110527690 LOC106582665 coding upstream 311638 36868740 ~ 36896763 (+)
LOC110527688 LOC106582663 coding upstream 528896 36668801 ~ 36679505 (+)
LOC110527686 LOC106582662 coding upstream 625423 36573811 ~ 36582978 (+)
LOC110527697 r3hdm2 coding downstream 55472 37264393 ~ 37342630 (+)
LOC110527699 LOC106582673 coding downstream 260089 37469010 ~ 37575510 (+)
LOC118965405 NA coding downstream 326143 37535064 ~ 37535117 (+)
LOC110527703 LOC106582676 coding downstream 753967 37950666 ~ 38002305 (+)
LOC110527704 LOC106582678 coding downstream 827075 38035996 ~ 38040937 (+)
G602383 NA non-coding upstream 1788 37206392 ~ 37206613 (+)
G602357 NA non-coding upstream 23330 37184792 ~ 37185071 (+)
G602352 NA non-coding upstream 30085 37177958 ~ 37178316 (+)
G602349 NA non-coding upstream 42192 37165920 ~ 37166209 (+)
G602338 NA non-coding upstream 61484 37146067 ~ 37146917 (+)
G602420 NA non-coding downstream 54845 37263766 ~ 37264203 (+)
G602455 NA non-coding downstream 137507 37346428 ~ 37346627 (+)
G603269 NA non-coding downstream 472966 37681887 ~ 37682097 (+)
G603350 NA non-coding downstream 527803 37736724 ~ 37736960 (+)
G603362 NA non-coding downstream 535404 37744325 ~ 37744547 (+)
G602295 gli1 other upstream 117645 37089624 ~ 37090756 (+)
G600531 NA other upstream 2236996 34971128 ~ 34971405 (+)
G600431 NA other upstream 2448743 34759347 ~ 34759658 (+)
G600013 NA other upstream 3241646 33966289 ~ 33966755 (+)
G604207 NA other downstream 1290110 38499031 ~ 38499662 (+)
G604258 NA other downstream 1375553 38584474 ~ 38594822 (+)
G606400 LOC105027254 other downstream 2917613 40126534 ~ 40141972 (+)
G606452 LOC106582711 other downstream 2997648 40206569 ~ 40206897 (+)
G606464 LOC106582711 other downstream 3014254 40223027 ~ 40224171 (+)

Expression


Co-expression Network