G602420


Basic Information

Item Value
gene id G602420
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 37263766 ~ 37264203 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU686300
tgtcctcttactcagttgtgcaccggggcctcccactcctctttctattctggttagagacagtttgctctgttctgtgaagggagtagtacacagcgttgaacgagatcttcagtttcttggcaatttctctcatggaatagccttcatttctcagaacaagaatagactgacgcgtttcagaagaaaggtctttgtttctggccattttgagcttgtaatcaaacccacaaatgctgatgctccagatactcaactagtctaaagaaggcccgttttattgctcCTTCAGCttcgttttcagctgtgctaacataattgcaaagggttttctaatgatcatttagccttttaaaatgataaacttggattagctaacacaacgtgccattggaacacaggagtgatggtttctgataatagcctactatgtagata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU686300 True 438 lncRNA 0.41 1 37263766 37264203

Neighbor

gene id symbol gene type direction distance location
arhgap9 LOC106582667 coding upstream 249712 36955176 ~ 37014054 (+)
LOC110527691 LOC106582666 coding upstream 350754 36907551 ~ 36913012 (+)
LOC110527690 LOC106582665 coding upstream 367003 36868740 ~ 36896763 (+)
LOC110527688 LOC106582663 coding upstream 584261 36668801 ~ 36679505 (+)
LOC110527686 LOC106582662 coding upstream 680788 36573811 ~ 36582978 (+)
LOC110527697 r3hdm2 coding downstream 190 37264393 ~ 37342630 (+)
LOC110527699 LOC106582673 coding downstream 204807 37469010 ~ 37575510 (+)
LOC118965405 NA coding downstream 270861 37535064 ~ 37535117 (+)
LOC110527703 LOC106582676 coding downstream 698685 37950666 ~ 38002305 (+)
LOC110527704 LOC106582678 coding downstream 771793 38035996 ~ 38040937 (+)
G602386 NA non-coding upstream 54845 37208401 ~ 37208921 (+)
G602383 NA non-coding upstream 57153 37206392 ~ 37206613 (+)
G602357 NA non-coding upstream 78695 37184792 ~ 37185071 (+)
G602352 NA non-coding upstream 85450 37177958 ~ 37178316 (+)
G602349 NA non-coding upstream 97557 37165920 ~ 37166209 (+)
G602455 NA non-coding downstream 82225 37346428 ~ 37346627 (+)
G603269 NA non-coding downstream 417684 37681887 ~ 37682097 (+)
G603350 NA non-coding downstream 472521 37736724 ~ 37736960 (+)
G603362 NA non-coding downstream 480122 37744325 ~ 37744547 (+)
G603370 NA non-coding downstream 492435 37756638 ~ 37756958 (+)
G602295 gli1 other upstream 173010 37089624 ~ 37090756 (+)
G600531 NA other upstream 2292361 34971128 ~ 34971405 (+)
G600431 NA other upstream 2504108 34759347 ~ 34759658 (+)
G600013 NA other upstream 3297011 33966289 ~ 33966755 (+)
G604207 NA other downstream 1234828 38499031 ~ 38499662 (+)
G604258 NA other downstream 1320271 38584474 ~ 38594822 (+)
G606400 LOC105027254 other downstream 2862331 40126534 ~ 40141972 (+)
G606452 LOC106582711 other downstream 2942366 40206569 ~ 40206897 (+)
G606464 LOC106582711 other downstream 2958972 40223027 ~ 40224171 (+)

Expression


Co-expression Network