G603350


Basic Information

Item Value
gene id G603350
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 37736724 ~ 37736960 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU687275
ATGTAGAAGACAGAAAGGTAAAGAGGTAAGAACAGTGgcagacagcatatgattaatgaattacagtgctaccctaatattctctcagttcatcacaattgcggtgtctcctaaccagcttTGGTTCCCCAGTTGGCCCGAAGGTTACCTcaagagcgggtgaggtggcgatgacgggactggcttcctctctcacatcaaaacatacctgcagacgagagacagatagatagagag

Function

NR:

description
PHD finger protein 21A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU687275 True 237 lncRNA 0.47 1 37736724 37736960

Neighbor

gene id symbol gene type direction distance location
LOC110527699 LOC106582673 coding upstream 161214 37469010 ~ 37575510 (+)
LOC118965405 NA coding upstream 201607 37535064 ~ 37535117 (+)
LOC110527697 r3hdm2 coding upstream 394094 37264393 ~ 37342630 (+)
arhgap9 LOC106582667 coding upstream 722670 36955176 ~ 37014054 (+)
LOC110527691 LOC106582666 coding upstream 823712 36907551 ~ 36913012 (+)
LOC110527703 LOC106582676 coding downstream 225928 37950666 ~ 38002305 (+)
LOC110527704 LOC106582678 coding downstream 299036 38035996 ~ 38040937 (+)
LOC110527708 LOC106582612 coding downstream 391420 38128380 ~ 38160898 (+)
LOC110527709 cdd coding downstream 425655 38162615 ~ 38170254 (+)
LOC110527711 LOC106582683 coding downstream 523419 38260379 ~ 38267346 (+)
G603269 NA non-coding upstream 54627 37681887 ~ 37682097 (+)
G602455 NA non-coding upstream 390097 37346428 ~ 37346627 (+)
G602420 NA non-coding upstream 472521 37263766 ~ 37264203 (+)
G602386 NA non-coding upstream 527803 37208401 ~ 37208921 (+)
G602383 NA non-coding upstream 530111 37206392 ~ 37206613 (+)
G603362 NA non-coding downstream 7365 37744325 ~ 37744547 (+)
G603370 NA non-coding downstream 19678 37756638 ~ 37756958 (+)
G603371 NA non-coding downstream 21193 37758153 ~ 37758358 (+)
G603463 NA non-coding downstream 195034 37931994 ~ 37934378 (+)
G602295 gli1 other upstream 645968 37089624 ~ 37090756 (+)
LOC110527686 LOC106582662 other upstream 1160652 36573811 ~ 36582978 (+)
G600531 NA other upstream 2765319 34971128 ~ 34971405 (+)
G600431 NA other upstream 2977066 34759347 ~ 34759658 (+)
G600013 NA other upstream 3769969 33966289 ~ 33966755 (+)
G604207 NA other downstream 762071 38499031 ~ 38499662 (+)
G604258 NA other downstream 847514 38584474 ~ 38594822 (+)
G606400 LOC105027254 other downstream 2389574 40126534 ~ 40141972 (+)
G606452 LOC106582711 other downstream 2469609 40206569 ~ 40206897 (+)
G606464 LOC106582711 other downstream 2486215 40223027 ~ 40224171 (+)

Expression


Co-expression Network