G603362


Basic Information

Item Value
gene id G603362
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 37744325 ~ 37744547 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU687287
ctcctttcctgcatgctcatcctgacatgaccctcagcatgacaatgtcaccagccatactgctcattctgtgcgtgatttcctgcaagacaggaatgtcagtattctgccatggccagcgaagagcccggatctcaatcccattgagcacgtctgggacctgtttggatcagagggtgagggctagggccattcccctcagaaatgtccggaaacttgcagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU687287 True 223 lncRNA 0.53 1 37744325 37744547

Neighbor

gene id symbol gene type direction distance location
LOC110527699 LOC106582673 coding upstream 168815 37469010 ~ 37575510 (+)
LOC118965405 NA coding upstream 209208 37535064 ~ 37535117 (+)
LOC110527697 r3hdm2 coding upstream 401695 37264393 ~ 37342630 (+)
arhgap9 LOC106582667 coding upstream 730271 36955176 ~ 37014054 (+)
LOC110527691 LOC106582666 coding upstream 831313 36907551 ~ 36913012 (+)
LOC110527703 LOC106582676 coding downstream 218341 37950666 ~ 38002305 (+)
LOC110527704 LOC106582678 coding downstream 291449 38035996 ~ 38040937 (+)
LOC110527708 LOC106582612 coding downstream 383833 38128380 ~ 38160898 (+)
LOC110527709 cdd coding downstream 418068 38162615 ~ 38170254 (+)
LOC110527711 LOC106582683 coding downstream 515832 38260379 ~ 38267346 (+)
G603350 NA non-coding upstream 7365 37736724 ~ 37736960 (+)
G603269 NA non-coding upstream 62228 37681887 ~ 37682097 (+)
G602455 NA non-coding upstream 397698 37346428 ~ 37346627 (+)
G602420 NA non-coding upstream 480122 37263766 ~ 37264203 (+)
G602386 NA non-coding upstream 535404 37208401 ~ 37208921 (+)
G603370 NA non-coding downstream 12091 37756638 ~ 37756958 (+)
G603371 NA non-coding downstream 13606 37758153 ~ 37758358 (+)
G603463 NA non-coding downstream 187447 37931994 ~ 37934378 (+)
G603599 NA non-coding downstream 354213 38098760 ~ 38099254 (+)
G602295 gli1 other upstream 653569 37089624 ~ 37090756 (+)
LOC110527686 LOC106582662 other upstream 1168253 36573811 ~ 36582978 (+)
G600531 NA other upstream 2772920 34971128 ~ 34971405 (+)
G600431 NA other upstream 2984667 34759347 ~ 34759658 (+)
G600013 NA other upstream 3777570 33966289 ~ 33966755 (+)
G604207 NA other downstream 754484 38499031 ~ 38499662 (+)
G604258 NA other downstream 839927 38584474 ~ 38594822 (+)
G606400 LOC105027254 other downstream 2381987 40126534 ~ 40141972 (+)
G606452 LOC106582711 other downstream 2462022 40206569 ~ 40206897 (+)
G606464 LOC106582711 other downstream 2478628 40223027 ~ 40224171 (+)

Expression


Co-expression Network