G603836


Basic Information

Item Value
gene id G603836
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 37992359 ~ 38002257 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU687792
tggattcaattgagattcaCAATTTGTCACTCAACACACAGTAACCTATAATGTCAGTGGAATTGGGTTTTAAGAATATCATCTTCACAAATTAATAGaaaaatgaaaagttgaaatgtcttgagtcagtaagtagtcaacccctttgttatggcgagcctaaataagttcaggaggacAAACTTGCTTTTAAAAAGaaatcacataagttgcatggactccaaTCTGTGTGCATGATttatgaatgactacctcatctctgtaccccacacatacaaatatctgtaaggtccctcagtgagTAGAGAATCTCCCCAGAAAGACCAGGGAgcagggccggctccaggcataTGCGACATAAACGGTCGCTTAGGGCCCCGACCGCTGAGGGGGCCTCaaccaaaaaataaaaaatatattttaggaaCTCAGTCCCGGGGTctaaacttactgttgagagttagaatagtagaatgcacaaggtgtaagttcaaaatttggttgtgcatcagcagtttttcctTGTTTTATCAGTCACTGACAATTGATCAATTAGcaatgtcagctaacaattttttgATTGGTAAAAATTTTGCTTGGGGCCGACGAAAATACCTGGGAGGTtgtccaatgcctcgcaaagaagggcaccgattgaTAAAtgggtataaaaaaaatattttaaaaaacactGAATATTCCTTTGAGTATGGtgttattaattaggctttggatgatgtatcaatacacccattcactacaaagatacaggcgtccttcataactcagttgccagagaggaagtaAACTGCTTTCATAATGAGGCCAATAGTAATTTGAAAATTTGGATGGATTGACAactttgtagttactccacaatactaaccttgtagaaggaagcctgtaccgaatgaaaatattccaaaacatgcatcctgcttgcaaaaaggcactaaagtCATACTGCACAAAatgtggtaaagaaattaacattttgtcctgaatactgagcattatgtttgggtcaaatccaagacaacacatcactgagtaccactcatattttcaagcattagtggtggctgcatcatgttatgggtatgcttgtcatcggcatgGACAAGATCATTAtttttgggataaaaataaatggaataggtaAAGgtaaaatcctaaaggaaaacttggttcagtctgctttccaatagaCAATGGGAGACAAAtgacaaggccaaatctacagttTGGTTGCTTactaagatgacattgaatgttcctgagtggccatgCTTCAGTTTCGATTTATATttatttgaaaatctatggctagacatgaaaatggttatctggcaatgatcaacaaccaacttgacagaggttaaatcattttttaaagaatgatgggcaaatgttgtacaatccaggtgtgcaaagctcttacacGTGTaattacccagaaatactcacatctgtaattgctgctaaaggtgtttctaactcagggggttgaataattaAAGACATAttagttttatttttcatatttaaaaaagaatgttagaatttttcttccactttgacatgacagagtattttgtgtagattatttaaaaaattcaatgaaatacattttaattccactttgtaactcaacaaaatgtggaaacagtcaagggagttgaatactttccgaaggcactgtacctactgtaaaatatggtggtggatctttgatgttatggggttatttgcttccactggtccggaggcccttgttaaggtcaacgtaATCATGGACTTTACCCaataccaggacattttagcccaaACTTAGTTGCCTCTgctaggaggctgaaacttggcagGAAGTGGATCGTCCAGCAAGAGAATAACCTCatgcacacatcaaaatccacaaataaaTGGTTATAATATTATTTGTTACACAAAATCTCGTTCTCTGAACAATTCAATTcgaataaaataatataatttcctaTTTTTTTTAGTATAcgatatagctcagtatttgaatgatttattttatacagtcatttatgCTCATCTTTATTAAGGGTGTCAgtcatttcagaccccactgtaaATCAATGGTAGGTTGTCATGTTGTGGAAAATAATGTACATGGtggtcacaggaggttggtggcaccttaggacaggctcgtggtaatggctggataggaataaatggaatggtatcaaatacatcaaacacatgggttCCATTTGTTTGATAGCATTGCATTAGCTCCATTCCTGCTAATAGTATGAGTCGTCCTTCCCACAACAGCCTCCAATGATGGTGTTGCATACTGTCTCTAACATCTGAGCATCATCAAAAACGTGTAAACACTATTAATAcatttcatatacagtaccagtcaaaagtttggacacgtactcattcaagggtttttctttattttttactattttctacattgtagaataatagcgaagacatcagaactatgaaataacacatatggaatcatgtggtaaccagaaaaagtattaaacaaatacaaatatatttcatatttgagattcttcaaagtagccaccctttgccttgatgacagctttgcacactcttggaattctctcaaccatcttcacctggaatgctcttccaaccgtcttgaagtagttcccacatatgctgagcacttgttggctgcttttccttcactgtgcggtccaactcatcccaaaccatctcaattgggttgaggtcgggtgatcgtggaggccaggtcatctgatgcagcactccatcactctccttcttggtcaaatagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU687792 True 2822 lncRNA 0.38 2 37992359 38002257

Neighbor

gene id symbol gene type direction distance location
LOC118965380 NA coding downstream 55983 37935371 ~ 37936376 (-)
LOC110527702 ppp1r16b coding downstream 59900 37803814 ~ 37932459 (-)
LOC110527701 LOC102797503 coding downstream 202510 37756561 ~ 37789849 (-)
LOC110527700 NA coding downstream 278213 37710179 ~ 37714146 (-)
LOC110527696 LOC106582672 coding downstream 743904 37239565 ~ 37248455 (-)
LOC110527705 LOC106582679 coding upstream 61032 38063289 ~ 38079634 (-)
LOC110527706 LOC105030694 coding upstream 90946 38093203 ~ 38096522 (-)
LOC110527710 LOC106582681 coding upstream 167926 38170183 ~ 38199500 (-)
LOC110528948 p38a coding upstream 211774 38214031 ~ 38260322 (-)
LOC110527712 LOC106593203 coding upstream 262114 38264371 ~ 38269527 (-)
G603752 NA non-coding downstream 78823 37856518 ~ 37913536 (-)
G603713 NA non-coding downstream 238219 37753725 ~ 37754140 (-)
G603714 NA non-coding downstream 238682 37753406 ~ 37753677 (-)
G603357 NA non-coding downstream 250566 37741541 ~ 37741793 (-)
G603931 NA non-coding upstream 88583 38090840 ~ 38091169 (-)
G603932 NA non-coding upstream 89130 38091387 ~ 38091667 (-)
G603938 NA non-coding upstream 98135 38100392 ~ 38100646 (-)
G601245 NA other downstream 2231089 35760699 ~ 35761270 (-)
G600881 NA other downstream 2937131 35001880 ~ 35055228 (-)
G600872 NA other downstream 3025573 34965447 ~ 34966786 (-)
G600721 NA other downstream 3377484 34614492 ~ 34614875 (-)
LOC110527679 LOC106565035 other downstream 4217745 33770050 ~ 33774908 (-)
G604485 NA other upstream 586898 38589155 ~ 38597519 (-)
G604484 NA other upstream 587160 38584293 ~ 38639400 (-)
LOC110527723 LOC106582696 other upstream 1060748 39063005 ~ 39123578 (-)
G606135 NA other upstream 1836634 39838891 ~ 39841331 (-)
LOC110527741 LOC106582711 other upstream 2221298 40135298 ~ 40275270 (-)

Expression


Co-expression Network