Gene
RNA
| Item | Value |
|---|---|
| gene id | G603607 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 38105954 ~ 38106164 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU687538 | True | 211 | lncRNA | 0.43 | 1 | 38105954 | 38106164 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527704 | LOC106582678 | coding | upstream | 65017 | 38035996 ~ 38040937 (+) |
| LOC110527703 | LOC106582676 | coding | upstream | 106316 | 37950666 ~ 38002305 (+) |
| LOC110527699 | LOC106582673 | coding | upstream | 530444 | 37469010 ~ 37575510 (+) |
| LOC118965405 | NA | coding | upstream | 570837 | 37535064 ~ 37535117 (+) |
| LOC110527697 | r3hdm2 | coding | upstream | 763324 | 37264393 ~ 37342630 (+) |
| LOC110527708 | LOC106582612 | coding | downstream | 22216 | 38128380 ~ 38160898 (+) |
| LOC110527709 | cdd | coding | downstream | 56451 | 38162615 ~ 38170254 (+) |
| LOC110527711 | LOC106582683 | coding | downstream | 154215 | 38260379 ~ 38267346 (+) |
| lhfpl5a | LOC106582689 | coding | downstream | 584176 | 38690340 ~ 38704044 (+) |
| LOC110527727 | LOC106582699 | coding | downstream | 1084917 | 39191081 ~ 39201578 (+) |
| G603599 | NA | non-coding | upstream | 6700 | 38098760 ~ 38099254 (+) |
| G603463 | NA | non-coding | upstream | 171576 | 37931994 ~ 37934378 (+) |
| G603371 | NA | non-coding | upstream | 347596 | 37758153 ~ 37758358 (+) |
| G603370 | NA | non-coding | upstream | 348996 | 37756638 ~ 37756958 (+) |
| G603626 | NA | non-coding | downstream | 22619 | 38128783 ~ 38129063 (+) |
| G603630 | NA | non-coding | downstream | 27018 | 38133182 ~ 38133404 (+) |
| G603634 | NA | non-coding | downstream | 31915 | 38138079 ~ 38138393 (+) |
| G603635 | NA | non-coding | downstream | 33617 | 38139781 ~ 38140008 (+) |
| G602295 | gli1 | other | upstream | 1015198 | 37089624 ~ 37090756 (+) |
| LOC110527686 | LOC106582662 | other | upstream | 1529882 | 36573811 ~ 36582978 (+) |
| G600531 | NA | other | upstream | 3134549 | 34971128 ~ 34971405 (+) |
| G600431 | NA | other | upstream | 3346296 | 34759347 ~ 34759658 (+) |
| G600013 | NA | other | upstream | 4139199 | 33966289 ~ 33966755 (+) |
| G604207 | NA | other | downstream | 392867 | 38499031 ~ 38499662 (+) |
| G604258 | NA | other | downstream | 478310 | 38584474 ~ 38594822 (+) |
| G606400 | LOC105027254 | other | downstream | 2020370 | 40126534 ~ 40141972 (+) |
| G606452 | LOC106582711 | other | downstream | 2100405 | 40206569 ~ 40206897 (+) |
| G606464 | LOC106582711 | other | downstream | 2117011 | 40223027 ~ 40224171 (+) |
