G603634


Basic Information

Item Value
gene id G603634
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 38138079 ~ 38138393 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU687572
agccagggaaaatgcagaatGCCAAATTTTtaaaaattactataaaaatcaaaacTTTCATTAattcacacatgcaagatagcaaattaaagctacacttgttgtgaatccagccaacatgtcagatttcaaaaaggcttttcggcaaaagcaaacgatgctattatctgaggatagcacctccgtaaacaaagagagaaaccatatttcaaccctgcaggcgcgacacaaaacgcagaaatacaaatataattcatcccttacctttgacgagcttcttttgttggcactcaggtcccataaacatcaaaatcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU687572 True 315 lncRNA 0.37 1 38138079 38138393

Neighbor

gene id symbol gene type direction distance location
LOC110527704 LOC106582678 coding upstream 97142 38035996 ~ 38040937 (+)
LOC110527703 LOC106582676 coding upstream 138441 37950666 ~ 38002305 (+)
LOC110527699 LOC106582673 coding upstream 562569 37469010 ~ 37575510 (+)
LOC118965405 NA coding upstream 602962 37535064 ~ 37535117 (+)
LOC110527697 r3hdm2 coding upstream 795449 37264393 ~ 37342630 (+)
LOC110527709 cdd coding downstream 24222 38162615 ~ 38170254 (+)
LOC110527711 LOC106582683 coding downstream 121986 38260379 ~ 38267346 (+)
lhfpl5a LOC106582689 coding downstream 551947 38690340 ~ 38704044 (+)
LOC110527727 LOC106582699 coding downstream 1052688 39191081 ~ 39201578 (+)
LOC110527729 LOC106582701 coding downstream 1090308 39228701 ~ 39240208 (+)
G603630 NA non-coding upstream 4675 38133182 ~ 38133404 (+)
G603626 NA non-coding upstream 9016 38128783 ~ 38129063 (+)
G603607 NA non-coding upstream 31915 38105954 ~ 38106164 (+)
G603599 NA non-coding upstream 38825 38098760 ~ 38099254 (+)
G603635 NA non-coding downstream 1388 38139781 ~ 38140008 (+)
G603709 NA non-coding downstream 130666 38269059 ~ 38269382 (+)
G604055 NA non-coding downstream 137630 38276023 ~ 38276222 (+)
G604057 NA non-coding downstream 142147 38280540 ~ 38281016 (+)
G602295 gli1 other upstream 1047323 37089624 ~ 37090756 (+)
LOC110527686 LOC106582662 other upstream 1562007 36573811 ~ 36582978 (+)
G600531 NA other upstream 3166674 34971128 ~ 34971405 (+)
G600431 NA other upstream 3378421 34759347 ~ 34759658 (+)
G600013 NA other upstream 4171324 33966289 ~ 33966755 (+)
G604207 NA other downstream 360638 38499031 ~ 38499662 (+)
G604258 NA other downstream 446081 38584474 ~ 38594822 (+)
G606400 LOC105027254 other downstream 1988141 40126534 ~ 40141972 (+)
G606452 LOC106582711 other downstream 2068176 40206569 ~ 40206897 (+)
G606464 LOC106582711 other downstream 2084782 40223027 ~ 40224171 (+)

Expression


Co-expression Network