G604049



Basic Information


Item Value
gene id G604049
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 38270689 ~ 38270930 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU688010
AGTCAATGTTCCGGTTCAGCAAAAATGTGGCATGCAACCTTGGGTTATGACAAACACTATGACAATGTTACACAGTTGGTGATACAATTCATAACTTACCTAGTTAAGATGCTCTGTTTTATTTTCCTTCCATCTTATCAGAATGTGCAGGCAGCCCTGCTACTGTCAAAAGTTCCATGCAGAAATGTTTTCGATGTCTCATAAATATGAGGTgtgcaaaaataaaaaatgtgacaTTAAGC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU688010 True 242 lncRNA 0.37 1 38270689 38270930

Neighbor


gene id symbol gene type direction distance location
LOC110527712 LOC106593203 coding downstream 1162 38264371 ~ 38269527 (-)
LOC110528948 p38a coding downstream 10367 38214031 ~ 38260322 (-)
LOC110527710 LOC106582681 coding downstream 71189 38170183 ~ 38199500 (-)
LOC110527706 LOC105030694 coding downstream 174167 38093203 ~ 38096522 (-)
LOC110527705 LOC106582679 coding downstream 191055 38063289 ~ 38079634 (-)
LOC110527714 LOC103464903 coding upstream 33100 38304030 ~ 38499669 (-)
LOC110527715 LOC106582687 coding upstream 261002 38531932 ~ 38659391 (-)
LOC110527716 LOC106582688 coding upstream 432307 38703237 ~ 38757485 (-)
LOC110527718 LOC106582690 coding upstream 499568 38770498 ~ 38793057 (-)
LOC110527719 LOC106582691 coding upstream 587938 38831707 ~ 38862874 (-)
G603962 NA non-coding downstream 136391 38134066 ~ 38134298 (-)
G603960 NA non-coding downstream 137886 38132561 ~ 38132803 (-)
G603956 NA non-coding downstream 140139 38130076 ~ 38130550 (-)
G603938 NA non-coding downstream 170043 38100392 ~ 38100646 (-)
G604058 NA non-coding upstream 9560 38280490 ~ 38280791 (-)
G604484 NA non-coding upstream 313363 38584293 ~ 38639400 (-)
G604491 NA non-coding upstream 335527 38606457 ~ 38606722 (-)
G604631 NA non-coding upstream 426586 38697516 ~ 38697822 (-)
G604677 NA non-coding upstream 510828 38781758 ~ 38782013 (-)
G601245 NA other downstream 2509419 35760699 ~ 35761270 (-)
G600881 NA other downstream 3215461 35001880 ~ 35055228 (-)
G600872 NA other downstream 3303903 34965447 ~ 34966786 (-)
G600721 NA other downstream 3655814 34614492 ~ 34614875 (-)
LOC110527679 LOC106565035 other downstream 4496075 33770050 ~ 33774908 (-)
G604485 NA other upstream 318225 38589155 ~ 38597519 (-)
LOC110527723 LOC106582696 other upstream 792075 39063005 ~ 39123578 (-)
G606135 NA other upstream 1567961 39838891 ~ 39841331 (-)
LOC110527741 LOC106582711 other upstream 1952625 40135298 ~ 40275270 (-)

Expression



Co-expression Network