G604608


Basic Information

Item Value
gene id G604608
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 38781619 ~ 38782102 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU688616
tctcactggtcacccccaaagctttccttccagttctctgctgccaatgacaggaacgaactgcaaaaatcactgaagctggagactcatatctctctcactagctttaagcaccagctgtcagagcagctcatggatcactgcacctgtacatagcccatctgtaaatagcccatccaactacctcatccccatactgtatttatgtatttatcttgTTCCTTTTGAACcccggtatctctacttgcacattcatcttctgcacatctaccattccagtgtttaattgctatattgtaattacttcgccaccatggcctatttattgccttacctcccttatcctacctcatttgcacacactgtatatatactttttctactgtattattgactgtatgtttgtttattccatgtgtaactctgtgttgttgtatgtcaaactgctgtgctttatcttggccaggtcgcagttgtaaatgag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU688616 True 484 lncRNA 0.42 1 38781619 38782102

Neighbor

gene id symbol gene type direction distance location
lhfpl5a LOC106582689 coding upstream 77575 38690340 ~ 38704044 (+)
LOC110527711 LOC106582683 coding upstream 514273 38260379 ~ 38267346 (+)
LOC110527709 cdd coding upstream 611365 38162615 ~ 38170254 (+)
LOC110527708 LOC106582612 coding upstream 620721 38128380 ~ 38160898 (+)
LOC110527704 LOC106582678 coding upstream 740682 38035996 ~ 38040937 (+)
LOC110527727 LOC106582699 coding downstream 408979 39191081 ~ 39201578 (+)
LOC110527729 LOC106582701 coding downstream 446599 39228701 ~ 39240208 (+)
LOC110527730 LOC106582703 coding downstream 509554 39291656 ~ 39310234 (+)
LOC110527735 LOC106582706 coding downstream 588628 39370730 ~ 39376856 (+)
LOC110527736 LOC106582707 coding downstream 651087 39433189 ~ 39773724 (+)
G604574 NA non-coding upstream 19957 38756619 ~ 38761662 (+)
G604567 LOC107680449 non-coding upstream 54018 38720692 ~ 38727601 (+)
G604267 NA non-coding upstream 179397 38598884 ~ 38602222 (+)
G604258 NA non-coding upstream 186797 38584474 ~ 38594822 (+)
G604191 NA non-coding upstream 251172 38523559 ~ 38530447 (+)
G604609 NA non-coding downstream 68 38782170 ~ 38782467 (+)
G604618 NA non-coding downstream 11294 38793396 ~ 38793697 (+)
G604692 NA non-coding downstream 15519 38797621 ~ 38797891 (+)
G604707 NA non-coding downstream 24413 38806515 ~ 38806731 (+)
G604709 NA non-coding downstream 25293 38807395 ~ 38807659 (+)
G604207 NA other upstream 281957 38499031 ~ 38499662 (+)
G602295 gli1 other upstream 1690863 37089624 ~ 37090756 (+)
LOC110527686 LOC106582662 other upstream 2205547 36573811 ~ 36582978 (+)
G600531 NA other upstream 3810214 34971128 ~ 34971405 (+)
G606400 LOC105027254 other downstream 1344432 40126534 ~ 40141972 (+)
G606452 LOC106582711 other downstream 1424467 40206569 ~ 40206897 (+)
G606464 LOC106582711 other downstream 1441073 40223027 ~ 40224171 (+)
G606469 NA other downstream 1448783 40230885 ~ 40231225 (+)
LOC110527751 NA other downstream 1656998 40438879 ~ 40457742 (+)

Expression


Co-expression Network