XLOC_025353



Basic Information


Item Value
gene id XLOC_025353
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 25572778 ~ 25573533 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00050032
ACTAGTTATGTCTGGCTTCACTCCATGGTCTTTCTGTGGTTATCTCTTCTCCACTCCTCCTCCATGGTTTCTCCCTCCATCGACTCCACCCTGGGCCATCCACCTGGCTGTGTCTTGGGTCCTCCTCCTGCCTCACCTTCCTCCTAGAACTCCTCCCTGGCCTCCTCCTCCATTCCATCCCCTCCAACTCCCCTCCTGGATCCTGTGACTCCTCACTGGCCTCCTCCTGTTTCCATGCACTCTCTCCTGGTTCCTCCTCCACAGACTCCCCTTCACCCCCTCCTTTCGTTTAGGTGCGGTGGTGTGCCTTTTAAAGGGGAGTGGGGAGGCGGGGAGGGGGTACTGTCACAACCTGACTTCCtcgtgtgtttattttttttcaccatgtGCTCCATTCTTCCAGTTCCAATCATTGTCATTACCCTCATTGTGTATTTAAGTCCTTGTATTCAGTTCAGCCATTGTCTGCTATATTCTCACTAGTTATGTCTGTCTTCActccatgttcttcctgtgttcatctCCGTAAGtcttgtaaatgaataaatgtgctTTGATAAACCTGAGATTGCCTTCTTCAATGTGAACCCAGGCGTTACAGTCATAACGTATAATCGCG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00050032 True 619 lncRNA 0.50 2 25572778 25573533

Neighbor


gene id symbol gene type direction distance location
XLOC_025352 mchr1b coding upstream 59961 25503442 ~ 25512817 (+)
XLOC_025351 NA coding upstream 263814 25308710 ~ 25308964 (+)
XLOC_025350 c1qtnf6a coding upstream 350116 25216790 ~ 25222662 (+)
XLOC_025349 il2rb coding upstream 363772 25191366 ~ 25209006 (+)
XLOC_025348 TST coding upstream 402947 25166805 ~ 25169831 (+)
XLOC_025354 NA coding downstream 30135 25603668 ~ 25624618 (+)
XLOC_025355 NA coding downstream 71698 25645231 ~ 25648375 (+)
XLOC_025356 NA coding downstream 127058 25700591 ~ 25720214 (+)
XLOC_025357 BX120006.2 coding downstream 172103 25745636 ~ 25746918 (+)
XLOC_025358 BX120006.1 coding downstream 178688 25752221 ~ 25753549 (+)
XLOC_025429 BX649540.1 misc downstream 4675206 30248739 ~ 30249036 (+)
XLOC_025344 CR936416.1 non-coding upstream 512658 25055976 ~ 25060120 (+)
XLOC_025342 NA non-coding upstream 636523 24930580 ~ 24936255 (+)
XLOC_025327 NA non-coding upstream 1120765 24438597 ~ 24452013 (+)
XLOC_025323 NA non-coding upstream 1355267 24217188 ~ 24217511 (+)

Expression



Co-expression Network