Gene
RNA
| Item | Value |
|---|---|
| gene id | G604618 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 38793396 ~ 38793697 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU688626 | True | 302 | lncRNA | 0.37 | 1 | 38793396 | 38793697 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lhfpl5a | LOC106582689 | coding | upstream | 89352 | 38690340 ~ 38704044 (+) |
| LOC110527711 | LOC106582683 | coding | upstream | 526050 | 38260379 ~ 38267346 (+) |
| LOC110527709 | cdd | coding | upstream | 623142 | 38162615 ~ 38170254 (+) |
| LOC110527708 | LOC106582612 | coding | upstream | 632498 | 38128380 ~ 38160898 (+) |
| LOC110527704 | LOC106582678 | coding | upstream | 752459 | 38035996 ~ 38040937 (+) |
| LOC110527727 | LOC106582699 | coding | downstream | 397384 | 39191081 ~ 39201578 (+) |
| LOC110527729 | LOC106582701 | coding | downstream | 435004 | 39228701 ~ 39240208 (+) |
| LOC110527730 | LOC106582703 | coding | downstream | 497959 | 39291656 ~ 39310234 (+) |
| LOC110527735 | LOC106582706 | coding | downstream | 577033 | 39370730 ~ 39376856 (+) |
| LOC110527736 | LOC106582707 | coding | downstream | 639492 | 39433189 ~ 39773724 (+) |
| G604609 | NA | non-coding | upstream | 10929 | 38782170 ~ 38782467 (+) |
| G604608 | NA | non-coding | upstream | 11294 | 38781619 ~ 38782102 (+) |
| G604574 | NA | non-coding | upstream | 31734 | 38756619 ~ 38761662 (+) |
| G604567 | LOC107680449 | non-coding | upstream | 65795 | 38720692 ~ 38727601 (+) |
| G604267 | NA | non-coding | upstream | 191174 | 38598884 ~ 38602222 (+) |
| G604692 | NA | non-coding | downstream | 3924 | 38797621 ~ 38797891 (+) |
| G604707 | NA | non-coding | downstream | 12818 | 38806515 ~ 38806731 (+) |
| G604709 | NA | non-coding | downstream | 13698 | 38807395 ~ 38807659 (+) |
| G604710 | NA | non-coding | downstream | 14320 | 38808017 ~ 38808242 (+) |
| G604774 | LOC106582693 | non-coding | downstream | 107025 | 38900722 ~ 38902373 (+) |
| G604258 | NA | other | upstream | 202102 | 38584474 ~ 38594822 (+) |
| G604207 | NA | other | upstream | 293734 | 38499031 ~ 38499662 (+) |
| G602295 | gli1 | other | upstream | 1702640 | 37089624 ~ 37090756 (+) |
| LOC110527686 | LOC106582662 | other | upstream | 2217324 | 36573811 ~ 36582978 (+) |
| G600531 | NA | other | upstream | 3821991 | 34971128 ~ 34971405 (+) |
| G606400 | LOC105027254 | other | downstream | 1332837 | 40126534 ~ 40141972 (+) |
| G606452 | LOC106582711 | other | downstream | 1412872 | 40206569 ~ 40206897 (+) |
| G606464 | LOC106582711 | other | downstream | 1429478 | 40223027 ~ 40224171 (+) |
| G606469 | NA | other | downstream | 1437188 | 40230885 ~ 40231225 (+) |
| LOC110527751 | NA | other | downstream | 1645403 | 40438879 ~ 40457742 (+) |
