Gene
RNA
| Item | Value |
|---|---|
| gene id | G604707 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 38806515 ~ 38806731 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU688717 | True | 217 | lncRNA | 0.31 | 1 | 38806515 | 38806731 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lhfpl5a | LOC106582689 | coding | upstream | 102471 | 38690340 ~ 38704044 (+) |
| LOC110527711 | LOC106582683 | coding | upstream | 539169 | 38260379 ~ 38267346 (+) |
| LOC110527709 | cdd | coding | upstream | 636261 | 38162615 ~ 38170254 (+) |
| LOC110527708 | LOC106582612 | coding | upstream | 645617 | 38128380 ~ 38160898 (+) |
| LOC110527704 | LOC106582678 | coding | upstream | 765578 | 38035996 ~ 38040937 (+) |
| LOC110527727 | LOC106582699 | coding | downstream | 384350 | 39191081 ~ 39201578 (+) |
| LOC110527729 | LOC106582701 | coding | downstream | 421970 | 39228701 ~ 39240208 (+) |
| LOC110527730 | LOC106582703 | coding | downstream | 484925 | 39291656 ~ 39310234 (+) |
| LOC110527735 | LOC106582706 | coding | downstream | 563999 | 39370730 ~ 39376856 (+) |
| LOC110527736 | LOC106582707 | coding | downstream | 626458 | 39433189 ~ 39773724 (+) |
| G604692 | NA | non-coding | upstream | 8624 | 38797621 ~ 38797891 (+) |
| G604618 | NA | non-coding | upstream | 12818 | 38793396 ~ 38793697 (+) |
| G604609 | NA | non-coding | upstream | 24048 | 38782170 ~ 38782467 (+) |
| G604608 | NA | non-coding | upstream | 24413 | 38781619 ~ 38782102 (+) |
| G604574 | NA | non-coding | upstream | 44853 | 38756619 ~ 38761662 (+) |
| G604709 | NA | non-coding | downstream | 664 | 38807395 ~ 38807659 (+) |
| G604710 | NA | non-coding | downstream | 1286 | 38808017 ~ 38808242 (+) |
| G604774 | LOC106582693 | non-coding | downstream | 93991 | 38900722 ~ 38902373 (+) |
| G604786 | LOC106582694 | non-coding | downstream | 125144 | 38931875 ~ 38934382 (+) |
| G604788 | NA | non-coding | downstream | 132752 | 38939483 ~ 38939741 (+) |
| G604258 | NA | other | upstream | 215221 | 38584474 ~ 38594822 (+) |
| G604207 | NA | other | upstream | 306853 | 38499031 ~ 38499662 (+) |
| G602295 | gli1 | other | upstream | 1715759 | 37089624 ~ 37090756 (+) |
| LOC110527686 | LOC106582662 | other | upstream | 2230443 | 36573811 ~ 36582978 (+) |
| G600531 | NA | other | upstream | 3835110 | 34971128 ~ 34971405 (+) |
| G606400 | LOC105027254 | other | downstream | 1319803 | 40126534 ~ 40141972 (+) |
| G606452 | LOC106582711 | other | downstream | 1399838 | 40206569 ~ 40206897 (+) |
| G606464 | LOC106582711 | other | downstream | 1416444 | 40223027 ~ 40224171 (+) |
| G606469 | NA | other | downstream | 1424154 | 40230885 ~ 40231225 (+) |
| LOC110527751 | NA | other | downstream | 1632369 | 40438879 ~ 40457742 (+) |
