Gene
RNA
| Item | Value |
|---|---|
| gene id | G604774 |
| gene name | LOC106582693 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 38900722 ~ 38902373 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| protein TASOR-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU688794 | True | 812 | lncRNA | 0.56 | 2 | 38900722 | 38902373 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lhfpl5a | LOC106582689 | coding | upstream | 196678 | 38690340 ~ 38704044 (+) |
| LOC110527711 | LOC106582683 | coding | upstream | 633376 | 38260379 ~ 38267346 (+) |
| LOC110527709 | cdd | coding | upstream | 730468 | 38162615 ~ 38170254 (+) |
| LOC110527708 | LOC106582612 | coding | upstream | 739824 | 38128380 ~ 38160898 (+) |
| LOC110527704 | LOC106582678 | coding | upstream | 859785 | 38035996 ~ 38040937 (+) |
| LOC110527727 | LOC106582699 | coding | downstream | 288708 | 39191081 ~ 39201578 (+) |
| LOC110527729 | LOC106582701 | coding | downstream | 326328 | 39228701 ~ 39240208 (+) |
| LOC110527730 | LOC106582703 | coding | downstream | 389283 | 39291656 ~ 39310234 (+) |
| LOC110527735 | LOC106582706 | coding | downstream | 468357 | 39370730 ~ 39376856 (+) |
| LOC110527736 | LOC106582707 | coding | downstream | 530816 | 39433189 ~ 39773724 (+) |
| G604710 | NA | non-coding | upstream | 92480 | 38808017 ~ 38808242 (+) |
| G604709 | NA | non-coding | upstream | 93063 | 38807395 ~ 38807659 (+) |
| G604707 | NA | non-coding | upstream | 93991 | 38806515 ~ 38806731 (+) |
| G604692 | NA | non-coding | upstream | 102831 | 38797621 ~ 38797891 (+) |
| G604618 | NA | non-coding | upstream | 107025 | 38793396 ~ 38793697 (+) |
| G604786 | LOC106582694 | non-coding | downstream | 29502 | 38931875 ~ 38934382 (+) |
| G604788 | NA | non-coding | downstream | 37110 | 38939483 ~ 38939741 (+) |
| G604789 | arhgef3 | non-coding | downstream | 37394 | 38939767 ~ 38940088 (+) |
| G604790 | NA | non-coding | downstream | 39588 | 38941961 ~ 38942183 (+) |
| G604793 | NA | non-coding | downstream | 44211 | 38946584 ~ 38946891 (+) |
| G604258 | NA | other | upstream | 309428 | 38584474 ~ 38594822 (+) |
| G604207 | NA | other | upstream | 401060 | 38499031 ~ 38499662 (+) |
| G602295 | gli1 | other | upstream | 1809966 | 37089624 ~ 37090756 (+) |
| LOC110527686 | LOC106582662 | other | upstream | 2324650 | 36573811 ~ 36582978 (+) |
| G600531 | NA | other | upstream | 3929317 | 34971128 ~ 34971405 (+) |
| G606400 | LOC105027254 | other | downstream | 1224161 | 40126534 ~ 40141972 (+) |
| G606452 | LOC106582711 | other | downstream | 1304196 | 40206569 ~ 40206897 (+) |
| G606464 | LOC106582711 | other | downstream | 1320802 | 40223027 ~ 40224171 (+) |
| G606469 | NA | other | downstream | 1328512 | 40230885 ~ 40231225 (+) |
| LOC110527751 | NA | other | downstream | 1536727 | 40438879 ~ 40457742 (+) |
