G604788


Basic Information

Item Value
gene id G604788
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 38939483 ~ 38939741 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU688814
TGCCACTCCAAAGTGTTGTGTTATTATGATCGACAGAGCACTACTCACAGCACCCCTGTTGTTCTTCAGTTCCCCGTGACAGCTGAGGATGCGGGAGCTGTCAATGAGTAGGTCTCTCTGGCTGCCCTCTAGGTAGAGGAGACGTTCCTTGTAGAAACGACACTCTGACTCGCCCGTCTGGGTGTTGATCTCTGCCACGATGCTCTGGATCATGTTgatctggagagagggagagatggagaagggttGTGAgtgagaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU688814 True 259 lncRNA 0.52 1 38939483 38939741

Neighbor

gene id symbol gene type direction distance location
lhfpl5a LOC106582689 coding upstream 235439 38690340 ~ 38704044 (+)
LOC110527711 LOC106582683 coding upstream 672137 38260379 ~ 38267346 (+)
LOC110527709 cdd coding upstream 769229 38162615 ~ 38170254 (+)
LOC110527708 LOC106582612 coding upstream 778585 38128380 ~ 38160898 (+)
LOC110527704 LOC106582678 coding upstream 898546 38035996 ~ 38040937 (+)
LOC110527727 LOC106582699 coding downstream 251340 39191081 ~ 39201578 (+)
LOC110527729 LOC106582701 coding downstream 288960 39228701 ~ 39240208 (+)
LOC110527730 LOC106582703 coding downstream 351915 39291656 ~ 39310234 (+)
LOC110527735 LOC106582706 coding downstream 430989 39370730 ~ 39376856 (+)
LOC110527736 LOC106582707 coding downstream 493448 39433189 ~ 39773724 (+)
G604786 LOC106582694 non-coding upstream 5101 38931875 ~ 38934382 (+)
G604774 LOC106582693 non-coding upstream 37110 38900722 ~ 38902373 (+)
G604710 NA non-coding upstream 131241 38808017 ~ 38808242 (+)
G604709 NA non-coding upstream 131824 38807395 ~ 38807659 (+)
G604707 NA non-coding upstream 132752 38806515 ~ 38806731 (+)
G604789 arhgef3 non-coding downstream 26 38939767 ~ 38940088 (+)
G604790 NA non-coding downstream 2220 38941961 ~ 38942183 (+)
G604793 NA non-coding downstream 6843 38946584 ~ 38946891 (+)
G604803 NA non-coding downstream 20221 38959962 ~ 38960174 (+)
G604853 NA non-coding downstream 80568 39020309 ~ 39020529 (+)
G604258 NA other upstream 348189 38584474 ~ 38594822 (+)
G604207 NA other upstream 439821 38499031 ~ 38499662 (+)
G602295 gli1 other upstream 1848727 37089624 ~ 37090756 (+)
LOC110527686 LOC106582662 other upstream 2363411 36573811 ~ 36582978 (+)
G600531 NA other upstream 3968078 34971128 ~ 34971405 (+)
G606400 LOC105027254 other downstream 1186793 40126534 ~ 40141972 (+)
G606452 LOC106582711 other downstream 1266828 40206569 ~ 40206897 (+)
G606464 LOC106582711 other downstream 1283434 40223027 ~ 40224171 (+)
G606469 NA other downstream 1291144 40230885 ~ 40231225 (+)
LOC110527751 NA other downstream 1499359 40438879 ~ 40457742 (+)

Expression


Co-expression Network