Gene
RNA
| Item | Value |
|---|---|
| gene id | G604853 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 39020309 ~ 39020529 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU688882 | True | 221 | lncRNA | 0.37 | 1 | 39020309 | 39020529 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lhfpl5a | LOC106582689 | coding | upstream | 316265 | 38690340 ~ 38704044 (+) |
| LOC110527711 | LOC106582683 | coding | upstream | 752963 | 38260379 ~ 38267346 (+) |
| LOC110527709 | cdd | coding | upstream | 850055 | 38162615 ~ 38170254 (+) |
| LOC110527708 | LOC106582612 | coding | upstream | 859411 | 38128380 ~ 38160898 (+) |
| LOC110527704 | LOC106582678 | coding | upstream | 979372 | 38035996 ~ 38040937 (+) |
| LOC110527727 | LOC106582699 | coding | downstream | 170552 | 39191081 ~ 39201578 (+) |
| LOC110527729 | LOC106582701 | coding | downstream | 208172 | 39228701 ~ 39240208 (+) |
| LOC110527730 | LOC106582703 | coding | downstream | 271127 | 39291656 ~ 39310234 (+) |
| LOC110527735 | LOC106582706 | coding | downstream | 350201 | 39370730 ~ 39376856 (+) |
| LOC110527736 | LOC106582707 | coding | downstream | 412660 | 39433189 ~ 39773724 (+) |
| G604803 | NA | non-coding | upstream | 60135 | 38959962 ~ 38960174 (+) |
| G604793 | NA | non-coding | upstream | 73418 | 38946584 ~ 38946891 (+) |
| G604790 | NA | non-coding | upstream | 78126 | 38941961 ~ 38942183 (+) |
| G604789 | arhgef3 | non-coding | upstream | 80221 | 38939767 ~ 38940088 (+) |
| G604788 | NA | non-coding | upstream | 80568 | 38939483 ~ 38939741 (+) |
| G604891 | NA | non-coding | downstream | 57661 | 39078190 ~ 39084490 (+) |
| G604923 | NA | non-coding | downstream | 117929 | 39138458 ~ 39139636 (+) |
| G604940 | NA | non-coding | downstream | 175126 | 39195655 ~ 39244952 (+) |
| G605027 | NA | non-coding | downstream | 304592 | 39325121 ~ 39333637 (+) |
| G605063 | NA | non-coding | downstream | 318337 | 39338866 ~ 39339150 (+) |
| G604258 | NA | other | upstream | 429015 | 38584474 ~ 38594822 (+) |
| G604207 | NA | other | upstream | 520647 | 38499031 ~ 38499662 (+) |
| G602295 | gli1 | other | upstream | 1929553 | 37089624 ~ 37090756 (+) |
| LOC110527686 | LOC106582662 | other | upstream | 2444237 | 36573811 ~ 36582978 (+) |
| G600531 | NA | other | upstream | 4048904 | 34971128 ~ 34971405 (+) |
| G606400 | LOC105027254 | other | downstream | 1106005 | 40126534 ~ 40141972 (+) |
| G606452 | LOC106582711 | other | downstream | 1186040 | 40206569 ~ 40206897 (+) |
| G606464 | LOC106582711 | other | downstream | 1202646 | 40223027 ~ 40224171 (+) |
| G606469 | NA | other | downstream | 1210356 | 40230885 ~ 40231225 (+) |
| LOC110527751 | NA | other | downstream | 1418571 | 40438879 ~ 40457742 (+) |
