G604891


Basic Information

Item Value
gene id G604891
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 39078190 ~ 39084490 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU688923
CCGAGGCATCAGCAGAGGCAGAAAACACACATTCCCTGTGGCTTCTATTACCACTGTGGGGagcggaggctgtgtgtgtgtacgcttaGAAGCTGAAAGAGCCTCCTCTTTGTGGTGGTGGTAACTCTACACCTCCTCCACTCCGTCCTTTACCTCTTCTACCGCCACACAGATACCATCAGCCTCACCGTCACCACgtcagacacagaggagagagaaaaaactgGAAGGAAAAAGCTGTCAGACAGGTTGGGCTGTCTTCCGGAGTGTTTCCCCCCCCCCTGGCGTCGATAGCTTCAGCTTTCTAACTACTTGATTCAAAGTAGGAAAGaGAGAATCACCCCCAAATCACACCTTAAAGAGAAGAAAGAGGATGGATCACAGCGCGTGGTTAAGATGGGAAGCTCAGAACAGGGCTCCCTGGATGAAGACTAATGGACAGATGATGCCCCGCTGTAAGAACCTGGAGATATTCACTGGTTCTGAGGGAGGTGACATGGACATGAAACAGTGCCAGGGACACACCTTCCAGCACTTCCTCTGTCTGGACAGCAGCCAGGGTGTGGTCAAGACATCTGCTGCAACTCCATCTTTAGTGTGCAGGCTCTGCTGCACCTGGGGGTAAAAAGGCATGGCAACACACTCCCAACAGTCATGTATGCTTAAACATACTTGTATGCTCATTTGTGTTTCTGGgggcaaaatatatatttaaaaaataataataaaaaaaagtaaataattatttttttatatatacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcag

Function

NR:

description
interleukin-17 receptor D-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU688923 True 818 lncRNA 0.48 3 39078190 39084490

Neighbor

gene id symbol gene type direction distance location
lhfpl5a LOC106582689 coding upstream 374146 38690340 ~ 38704044 (+)
LOC110527711 LOC106582683 coding upstream 810844 38260379 ~ 38267346 (+)
LOC110527709 cdd coding upstream 907936 38162615 ~ 38170254 (+)
LOC110527708 LOC106582612 coding upstream 917292 38128380 ~ 38160898 (+)
LOC110527704 LOC106582678 coding upstream 1037253 38035996 ~ 38040937 (+)
LOC110527727 LOC106582699 coding downstream 106591 39191081 ~ 39201578 (+)
LOC110527729 LOC106582701 coding downstream 144211 39228701 ~ 39240208 (+)
LOC110527730 LOC106582703 coding downstream 207166 39291656 ~ 39310234 (+)
LOC110527735 LOC106582706 coding downstream 286240 39370730 ~ 39376856 (+)
LOC110527736 LOC106582707 coding downstream 348699 39433189 ~ 39773724 (+)
G604853 NA non-coding upstream 57661 39020309 ~ 39020529 (+)
G604803 NA non-coding upstream 118016 38959962 ~ 38960174 (+)
G604793 NA non-coding upstream 131299 38946584 ~ 38946891 (+)
G604790 NA non-coding upstream 136007 38941961 ~ 38942183 (+)
G604789 arhgef3 non-coding upstream 138102 38939767 ~ 38940088 (+)
G604923 NA non-coding downstream 53968 39138458 ~ 39139636 (+)
G604940 NA non-coding downstream 111165 39195655 ~ 39244952 (+)
G605027 NA non-coding downstream 240631 39325121 ~ 39333637 (+)
G605063 NA non-coding downstream 254376 39338866 ~ 39339150 (+)
G605077 NA non-coding downstream 269139 39353629 ~ 39353918 (+)
G604258 NA other upstream 486896 38584474 ~ 38594822 (+)
G604207 NA other upstream 578528 38499031 ~ 38499662 (+)
G602295 gli1 other upstream 1987434 37089624 ~ 37090756 (+)
LOC110527686 LOC106582662 other upstream 2502118 36573811 ~ 36582978 (+)
G600531 NA other upstream 4106785 34971128 ~ 34971405 (+)
G606400 LOC105027254 other downstream 1042044 40126534 ~ 40141972 (+)
G606452 LOC106582711 other downstream 1122079 40206569 ~ 40206897 (+)
G606464 LOC106582711 other downstream 1138685 40223027 ~ 40224171 (+)
G606469 NA other downstream 1146395 40230885 ~ 40231225 (+)
LOC110527751 NA other downstream 1354610 40438879 ~ 40457742 (+)

Expression


Co-expression Network