Gene
RNA
| Item | Value |
|---|---|
| gene id | G604923 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 39138458 ~ 39139636 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| DCC-interacting protein 13-alpha-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU688961 | True | 983 | lncRNA | 0.43 | 2 | 39138458 | 39139636 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lhfpl5a | LOC106582689 | coding | upstream | 434414 | 38690340 ~ 38704044 (+) |
| LOC110527711 | LOC106582683 | coding | upstream | 871112 | 38260379 ~ 38267346 (+) |
| LOC110527709 | cdd | coding | upstream | 968204 | 38162615 ~ 38170254 (+) |
| LOC110527708 | LOC106582612 | coding | upstream | 977560 | 38128380 ~ 38160898 (+) |
| LOC110527704 | LOC106582678 | coding | upstream | 1097521 | 38035996 ~ 38040937 (+) |
| LOC110527727 | LOC106582699 | coding | downstream | 51445 | 39191081 ~ 39201578 (+) |
| LOC110527729 | LOC106582701 | coding | downstream | 89065 | 39228701 ~ 39240208 (+) |
| LOC110527730 | LOC106582703 | coding | downstream | 152020 | 39291656 ~ 39310234 (+) |
| LOC110527735 | LOC106582706 | coding | downstream | 231094 | 39370730 ~ 39376856 (+) |
| LOC110527736 | LOC106582707 | coding | downstream | 293553 | 39433189 ~ 39773724 (+) |
| G604891 | NA | non-coding | upstream | 53968 | 39078190 ~ 39084490 (+) |
| G604853 | NA | non-coding | upstream | 117929 | 39020309 ~ 39020529 (+) |
| G604803 | NA | non-coding | upstream | 178284 | 38959962 ~ 38960174 (+) |
| G604793 | NA | non-coding | upstream | 191567 | 38946584 ~ 38946891 (+) |
| G604790 | NA | non-coding | upstream | 196275 | 38941961 ~ 38942183 (+) |
| G604940 | NA | non-coding | downstream | 56019 | 39195655 ~ 39244952 (+) |
| G605027 | NA | non-coding | downstream | 185485 | 39325121 ~ 39333637 (+) |
| G605063 | NA | non-coding | downstream | 199230 | 39338866 ~ 39339150 (+) |
| G605077 | NA | non-coding | downstream | 213993 | 39353629 ~ 39353918 (+) |
| G605079 | NA | non-coding | downstream | 215883 | 39355519 ~ 39355791 (+) |
| G604258 | NA | other | upstream | 547164 | 38584474 ~ 38594822 (+) |
| G604207 | NA | other | upstream | 638796 | 38499031 ~ 38499662 (+) |
| G602295 | gli1 | other | upstream | 2047702 | 37089624 ~ 37090756 (+) |
| LOC110527686 | LOC106582662 | other | upstream | 2562386 | 36573811 ~ 36582978 (+) |
| G600531 | NA | other | upstream | 4167053 | 34971128 ~ 34971405 (+) |
| G606400 | LOC105027254 | other | downstream | 986898 | 40126534 ~ 40141972 (+) |
| G606452 | LOC106582711 | other | downstream | 1066933 | 40206569 ~ 40206897 (+) |
| G606464 | LOC106582711 | other | downstream | 1083539 | 40223027 ~ 40224171 (+) |
| G606469 | NA | other | downstream | 1091249 | 40230885 ~ 40231225 (+) |
| LOC110527751 | NA | other | downstream | 1299464 | 40438879 ~ 40457742 (+) |
